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View Structure Prediction Details

Protein: gus-PB, gus-PC
Organism: Drosophila melanogaster
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gus-PB, gus-PC.

Description E-value Query
Range
Subject
Range
gus-PE - The gene gustavus is referred to in FlyBase by the symbol Dmel\gus (CG2944, FBgn0026238). It is a pr...
239.0 [0..1] [343..9]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKGGRTPSI RSSERRRPQS VSSISTLSPR VVLSRLEPRE FERLRLSYKI AIDQRRSRSC  60
   61 RGMNMGQKIS GGVKTVSRND SQSTFKPIIP RELQADFVKP ARIDILLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [109-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPASRDLQL KHSWNSEDRS LNIFVKEDDK LTFHRHPVAQ STDCIRGKVG LTKGLHIWEI  60
   61 YWPTRQRGTH AVVGVCTADA PLHSVGYQSL VGSTEQSWGW DLGRNKLYHD SKNCAGVTYP 120
  121 AILKNDEAFL VPDKFLVALD MDEGTLSFIV DQQYLGIAFR GLRGKKLYPI VSAVWGHCEI 180
  181 TMRYIGGLDP EPLPLMDLCR RTIRQKIGRT NLEEHIQQLQ LPLSMKTYLL YKNRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 2fnjA
Description: No description for 2fnjA was found.

Predicted functions:

Term Confidence Notes
binding 1.35172572100661 bayes_pls_golite062009
protein binding 0.524849326544427 bayes_pls_golite062009
carbohydrate binding 0.456644264180763 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle