| Protein: | p120ctn-PA |
| Organism: | Drosophila melanogaster |
| Length: | 781 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for p120ctn-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
522.0 | [0..1] | [781..1] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MEARSLKHSL IGLNMNSTHI NMDLSLTHEP ANMQSQFGSF QNYDQFSAAG YSSTPLYITK 60
61 PTGVGAITKV APHCSQNKIE TNSTDNSIPD IENHPLATTV RYVQAGQYED TSEYGVAGLT 120
121 CGIDSEYTAE AVVPYCYTSD ANYTGIQNTT SSIKPFSGRP FNDNINGAEA VADSQCRTFK 180
181 SSA
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1ejlI |
| Description: | Importin alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [184-626] |
1 11 21 31 41 51
| | | | | |
1 EFKLPQFAMS SINTVPQRLE EKDDYIEGSE NDICSTMRWR DPNLSEVISF LSNPSSAIKA 60
61 NAAAYLQHLC YMDDPNKQRT RSLGGIPPLV RLLSYDSPEI HKNACGALRN LSYGRQNDEN 120
121 KRGIKNAGGI AALVHLLCRS QETEVKELVT GVLWNMSSCE DLKRSIIDEA LVAVVCSVIK 180
181 PHSGWDAVCC GETCFSTVFR NASGVLRNVS SAGEHARGCL RNCEHLVECL LYVVRTSIEK 240
241 NNIGNKTVEN CVCILRNLSY RCQEVDDPNY DKHPFITPER VIPSSSKGEN LGCFGTNKKK 300
301 KEANNSDALN EYNISADYSK SSVTYNKLNK GYEQLWQPEV VQYYLSLLQS CSNPETLEAA 360
361 AGAIQNLSAC YWQPSIDIRA TVRKEKGLPI LVELLRMEVD RVVCAVATAL RNLAIDQRNK 420
421 ELIGKYAMRD LVQKLPSGNV QHD
|
| Detection Method: | |
| Confidence: | 29.69897 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.99013774955562 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.83254788740042 | bayes_pls_golite062009 |
| protein binding | 1.75981610748679 | bayes_pls_golite062009 |
| RPTP-like protein binding | 1.38347756516661 | bayes_pls_golite062009 |
| cadherin binding | 0.1400783779596 | bayes_pls_golite062009 |
|
Region A: Residues: [627-696] |
1 11 21 31 41 51
| | | | | |
1 QNTSDDTITA VLATINEVIK KNPEFSRSLL DSGGIDRLMN ITKRKEKYTS CVLKFASQVL 60
61 YTMWQHNELR
|
| Detection Method: | |
| Confidence: | 59.221849 |
| Match: | 1xm9A |
| Description: | Structure of the armadillo repeat domain of plakophilin 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [697-781] |
1 11 21 31 41 51
| | | | | |
1 DVYKKNGWKE QDFVSKHFTA HNTPPSSPNN VNNTLNRPMA SQGRTRYEDR TIQRGTSTLY 60
61 SANDSSGAVM SNESAMLSEM VRKQL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
