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View Structure Prediction Details

Protein: ARGI1_RAT
Organism: Rattus norvegicus
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARGI1_RAT.

Description E-value Query
Range
Subject
Range
gi|14488502, gi|... - gi|14488502|pdb|1HQX|C Chain C, R308k Arginase Variant, gi|14488501|pdb|1HQX|B Chain B, R308k Argina...
363.0 [0..1] [323..1]
gi|74146247 - gi|74146247|dbj|BAE28901.1| unnamed protein product [Mus musculus]
362.0 [0..1] [323..13]
ARGI1_BOVIN - Arginase-1 OS=Bos taurus GN=ARG1 PE=2 SV=1
358.0 [0..1] [323..1]
ARGI1_PIG - Arginase-1 OS=Sus scrofa GN=ARG1 PE=2 SV=1
358.0 [0..1] [323..1]
gi|75765394, gi|... - gi|75765395|pdb|1WVB|B Chain B, Crystal Structure Of Human Arginase I: The Mutant E256q, gi|75765394...
356.0 [0..1] [323..1]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKPKPIEI IGAPFSKGQP RGGVEKGPAA LRKAGLVEKL KETEYNVRDH GDLAFVDVPN  60
   61 DSPFQIVKNP RSVGKANEQL AAVVAETQKN GTISVVLGGD HSMAIGSISG HARVHPDLCV 120
  121 IWVDAHTDIN TPLTTSSGNL HGQPVAFLLK ELKGKFPDVP GFSWVTPCIS AKDIVYIGLR 180
  181 DVDPGEHYII KTLGIKYFSM TEVDKLGIGK VMEETFSYLL GRKKRPIHLS FDVDGLDPVF 240
  241 TPATGTPVVG GLSYREGLYI TEEIYKTGLL SGLDIMEVNP TLGKTPEEVT RTVNTAVALT 300
  301 LSCFGTKREG NHKPETDYLK PPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1d3vA
Description: Arginase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
arginase activity 6.53441421234691 bayes_pls_golite062009
agmatinase activity 3.73238467801147 bayes_pls_golite062009
protein deacetylase activity 3.15425266272734 bayes_pls_golite062009
histone deacetylase activity 3.10913119405575 bayes_pls_golite062009
transcription regulator activity 2.52770743634098 bayes_pls_golite062009
hydrolase activity 2.11707868768295 bayes_pls_golite062009
transcription factor binding 2.06538836131829 bayes_pls_golite062009
binding 1.948738669065 bayes_pls_golite062009
deacetylase activity 1.91016771390707 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.72243397396987 bayes_pls_golite062009
transcription repressor activity 1.70671280294121 bayes_pls_golite062009
catalytic activity 1.68836803454021 bayes_pls_golite062009
nucleic acid binding 1.59562744871718 bayes_pls_golite062009
DNA binding 1.55288325159263 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.01223037319069 bayes_pls_golite062009
transcription factor activity 0.882841288306625 bayes_pls_golite062009
protein binding 0.725535842743004 bayes_pls_golite062009
transcription cofactor activity 0.68008378742866 bayes_pls_golite062009
transcription corepressor activity 0.52929003055123 bayes_pls_golite062009
enzyme binding 0.39566582482721 bayes_pls_golite062009
specific transcriptional repressor activity 0.38389503761392 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0.0917282383800223 bayes_pls_golite062009

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