| Protein: | HXA7_RAT |
| Organism: | Rattus norvegicus |
| Length: | 105 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HXA7_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
121.0 | [0..2] | [90..126] |
|
|
120.0 | [0..2] | [90..126] |
|
|
112.0 | [0..4] | [85..298] |
|
|
112.0 | [0..1] | [102..185] |
|
|
112.0 | [0..2] | [91..102] |
|
|
111.0 | [0..2] | [77..224] |
|
|
111.0 | [0..4] | [67..545] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 LGPDGKRGRQ TYTRYQTLEL EKEFHFNRYL TRRRAVEIAH ALCLTERQIK IWFQNRRMKW 60
61 KKEHKDESQA PTAVPEDAVP SVSTAADKAD EEEEEEEEEE EEEEE
|
| Detection Method: |  |
| Confidence: | 17.522879 |
| Match: | 1homA |
| Description: | DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.82910876106939 | bayes_pls_golite062009 |
| DNA binding | 2.71139715874068 | bayes_pls_golite062009 |
| binding | 2.59102816487173 | bayes_pls_golite062009 |
| nucleic acid binding | 2.4041998404334 | bayes_pls_golite062009 |
| transcription factor activity | 2.30605638403993 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.81835017168096 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.46122830109379 | bayes_pls_golite062009 |
| protein binding | 0.853351196918381 | bayes_pls_golite062009 |
| transcription activator activity | 0.81440394306575 | bayes_pls_golite062009 |
| transcription repressor activity | 0.77814500281111 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.57338514991304 | bayes_pls_golite062009 |
| transcription factor binding | 0.22865859991459 | bayes_pls_golite062009 |
| chromatin binding | 0.203837749053719 | bayes_pls_golite062009 |
