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View Structure Prediction Details

Protein: IBP7_MOUSE
Organism: Mus musculus
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IBP7_MOUSE.

Description E-value Query
Range
Subject
Range
gi|26390450, gi|... - gi|26390450|dbj|BAC25899.1| unnamed protein product [Mus musculus], gi|120952633|ref|NP_001073378.1|...
198.0 [0..9] [281..1]
gi|73979175 - gi|73979175|ref|XP_857002.1| PREDICTED: similar to fibroblast growth factor receptor 1 isoform 3 pre...
197.0 [0..9] [281..1]
gi|182532, gi|31... - gi|31389|emb|CAA40401.1| Fibroblast Growth Factor Receptor, 2-Ig Domain+2 AA insert [Homo sapiens], ...
197.0 [0..9] [281..1]
gi|114619747, gi... - gi|114619747|ref|XP_001171229.1| PREDICTED: fibroblast growth factor receptor 1 isoform 15 [Pan trog...
196.0 [0..9] [281..1]

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Predicted Domain #1
Region A:
Residues: [1-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERPPRALLL GAAGLLLLLL PLSSSSSSDA CGPCVPASCP ALPRLGCPLG ETRDACGCCP  60
   61 VCARGEGEPC GGGAAGRGHC APGMECVKSR KRRKGKAGAA AGGPATLAVC VCKSRYPVCG 120
  121 SNGITYPSGC QLRAASLRAE SRGEKAITQV SKGTCEQGPS IVTPPKDIWN VTGAKVFLSC 180
  181 EVIGIPTPVL IWNKVKRDHS GVQRTELLPG DRENLAIQTR GGPEKHEVTG WVLVSPLSKE 240
  241 DAGEYECHAS NSQGQASAAA KITVVDALHE IPLKKGEGAQ L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.39794
Match: 1bihA
Description: Hemolin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antigen binding 4.06466268219034 bayes_pls_golite062009
binding 2.27505133637052 bayes_pls_golite062009
receptor binding 2.02804857578002 bayes_pls_golite062009
integrin binding 0.996898220355161 bayes_pls_golite062009
protein binding 0.922525634448349 bayes_pls_golite062009
growth factor binding 0.895000852954829 bayes_pls_golite062009
signal transducer activity 0.583090878683229 bayes_pls_golite062009
molecular transducer activity 0.583090878683229 bayes_pls_golite062009
nucleic acid binding 0.25592513773819 bayes_pls_golite062009
receptor activity 0.191524908565499 bayes_pls_golite062009
DNA binding 0.0603879226946033 bayes_pls_golite062009
protein complex binding 0.0293487495961741 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle