| Protein: | BAMBI_MOUSE |
| Organism: | Mus musculus |
| Length: | 260 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAMBI_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
557.0 | [0..1] | [260..1] |
|
|
556.0 | [0..1] | [260..1] |
|
|
556.0 | [0..1] | [260..1] |
|
|
554.0 | [0..1] | [260..1] |
|
|
554.0 | [0..1] | [260..1] |
|
|
551.0 | [0..1] | [260..1] |
|
|
550.0 | [0..1] | [260..1] |
|
|
544.0 | [0..1] | [260..1] |
|
|
527.0 | [0..1] | [260..1] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MDRHSSYFFI WLQLELCAMA VLLTKGEIRC YCDAAHCVAT GYMCKSELSA CFSRLLDPQN 60
61 TNSPLTHGCL DSLASTADIC RAKQAQNHSG PAMPTLECCH EDMCNYRGLH DVLSPSKSEA 120
121 SGQGNRYQHD SSRNLITKMQ ELTSSKELWF RAAVIAVPIA GGLILVLLIM LALRMLRS
|
| Detection Method: |  |
| Confidence: | 2.1 |
| Match: | 1rewC |
| Description: | Structural refinement of the complex of bone morphogenetic protein 2 and its type IA receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 2.64910374554654 | bayes_pls_golite062009 |
| signal transducer activity | 2.43282761870804 | bayes_pls_golite062009 |
| molecular transducer activity | 2.43282761870804 | bayes_pls_golite062009 |
| binding | 1.74649131569568 | bayes_pls_golite062009 |
| transforming growth factor beta binding | 1.53779699320828 | bayes_pls_golite062009 |
| SMAD binding | 1.15687191322558 | bayes_pls_golite062009 |
| protein binding | 1.15266632427905 | bayes_pls_golite062009 |
| receptor binding | 1.07792597575757 | bayes_pls_golite062009 |
| growth factor binding | 0.896615500077067 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 0.679269866160119 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 0.614566148594713 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 0.614566148594713 | bayes_pls_golite062009 |
| type I transforming growth factor beta receptor binding | 0.486943436794948 | bayes_pls_golite062009 |
|
Region A: Residues: [179-260] |
1 11 21 31 41 51
| | | | | |
1 ENKRLQDERQ QMLSRLHYSF HGHHSKKGQV AKLDLECMVP VSGQENCCLT CDKMRQAELS 60
61 NEKILSLVHW GMYSGHGKLE FI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
