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View Structure Prediction Details

Protein: gi|148693455, gi...
Organism: Mus musculus
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|148693455, gi....

Description E-value Query
Range
Subject
Range
gi|74203656 - gi|74203656|dbj|BAE23083.1| unnamed protein product [Mus musculus]
145.0 [0..15] [106..15]
gi|34863048, gi|... - gi|34863048|ref|XP_347100.1| PREDICTED: hypothetical protein [Rattus norvegicus], gi|157817037|ref|N...
142.0 [0..9] [103..10]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFLRLCLF LLCFETGFPL QCVQCQSYKN GECATKKETC TTKPGETCMI RRTWYANEIH  60
   61 NLQDAETKCT NSCKFEEKTS GYLTTHTYCC SHGDFCNDIN LPIVMT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.967
Match: 1rewC
Description: Structural refinement of the complex of bone morphogenetic protein 2 and its type IA receptor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.48501645994556 bayes_pls_golite062009
receptor binding 1.36347351391134 bayes_pls_golite062009
protein binding 0.89709218039418 bayes_pls_golite062009
signal transducer activity 0.57286627123028 bayes_pls_golite062009
molecular transducer activity 0.57286627123028 bayes_pls_golite062009
glycosaminoglycan binding 0.167265061929609 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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