| Protein: | Poxm-PC |
| Organism: | Drosophila melanogaster |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Poxm-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..1] | [329..13] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MDPESQCPQY GEVNQLGGVF VNGRPLPNAT RMRIVELARL GIRPCDISRQ LRVSHGCVSK 60
61 ILARYHETGS ILPGAIGGSK PRVTTPKVVN YIRELKQRDP GIFAWEIRDR LLSEGICDKT 120
121 NVPSVSSISR ILRNKLGSLG HQHTPGTVMG SGSSSGGG
|
| Detection Method: |  |
| Confidence: | 56.045757 |
| Match: | 1k78A |
| Description: | Pax-5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.5139760613123 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.16896789933192 | bayes_pls_golite062009 |
| transcription activator activity | 3.10621734076555 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| protein binding | 1.88087411289001 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.73068440195944 | bayes_pls_golite062009 |
| chromatin binding | 1.68956710349366 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
|
Region A: Residues: [159-256] |
1 11 21 31 41 51
| | | | | |
1 SVSSNGGQNN GTSASNNINL SNLGNPGGGP HHPHHHHHHQ SAAAAASAHH VHAHAHAHAH 60
61 LYNSIYQPYS AAAAYSMKTP CGSPSPPQGA GGQGSVPH
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.5139760613123 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.16896789933192 | bayes_pls_golite062009 |
| transcription activator activity | 3.10621734076555 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| protein binding | 1.88087411289001 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.73068440195944 | bayes_pls_golite062009 |
| chromatin binding | 1.68956710349366 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
|
Region A: Residues: [257-370] |
1 11 21 31 41 51
| | | | | |
1 PHQLRSVAAA AAAAHWPSSH SVSDILAHHQ AVALRASCQV GVGVGGMGGM GSTVSPLPMT 60
61 PSPVAGTAGG QPLLDCEGGA GQQSPYNYYM YFQNGGMHHH HHHGGMMAAG ATGL
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1o6dA |
| Description: | Crystal structure of a hypothetical protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.10377840258047 | bayes_pls_golite062009 |
| binding | 1.70581877784522 | bayes_pls_golite062009 |
| protein binding | 1.35119799527292 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 1.08303391887125 | bayes_pls_golite062009 |
| catalytic activity | 0.759273731741151 | bayes_pls_golite062009 |
| transferase activity | 0.29748053214444 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 0.100848174559199 | bayes_pls_golite062009 |
| methyltransferase activity | 0.0951797097761462 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.0869374373560942 | bayes_pls_golite062009 |
