| Protein: | TYDP1_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYDP1_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
543.0 | [0..14] | [535..228] |
|
|
542.0 | [0..14] | [535..160] |
|
|
541.0 | [0..14] | [535..159] |
|
|
537.0 | [0..21] | [535..164] |
|
|
537.0 | [0..14] | [535..154] |
|
|
530.0 | [0..21] | [535..164] |
|
Region A: Residues: [1-536] |
1 11 21 31 41 51
| | | | | |
1 MSTLEPEKRR QHEDKSNEII DSPIFLNKIS ALPESENVHC LLLKQLIGSP QLKQTWQFNF 60
61 CVDLNFLLEN MHASVFPTVD VRITHGYDSK SDSLARLTAQ MNHCPVNVKL YSVYVPMWGT 120
121 HHSKIMVNFF KDDSCQIVIH TANLVEPDWI GMSQAIFKTP LLYPKANDSL STSSVPEYGN 180
181 PSKIRKHEGS LDIKDDRNCD IIDVDSAFEN FKHKSDTRSS DDLGVIGRQF QQDFLAYLKN 240
241 YRHTYELIEK LKMYDFSAIR AIFIGSVPGK FEGEEESSWG LGKLKKILKM LEKDSKKDEK 300
301 TKFEESDICI SQCSSMGSFG PKQEYIAELT DGFGCQRGNW KFLFPTVKEV QQSMLGWQSG 360
361 SSIHFNILGK TAASQVETLK KGKNLCKWVA MKAGRQRVAP HIKTYMRFSN DGELLRWVLV 420
421 TSANLSKPAW GTLEGHKAKS RSTRGLRIRS YEAGVLLYPK LFEESQRAPC IMTPTYKTNT 480
481 PNLDEKRREF YGKRVIGVRM CWDFPPVEYE DKDEIWSPVI NRTDKDWLGY VWPPNW
|
| Detection Method: |  |
| Confidence: | 154.0 |
| Match: | 1qzqA |
| Description: | human Tyrosyl DNA phosphodiesterase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3'-tyrosyl-DNA phosphodiesterase activity | 1.46693175347055 | bayes_pls_golite062009 |
| tyrosyl-DNA phosphodiesterase activity | 1.46693175347055 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.41591686174898 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.29668490323599 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.29429720882252 | bayes_pls_golite062009 |
| catalytic activity | 1.29236214516383 | bayes_pls_golite062009 |
| binding | 1.26667168593698 | bayes_pls_golite062009 |
| nucleic acid binding | 0.926017334343152 | bayes_pls_golite062009 |
| DNA binding | 0.840595330626189 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.235198647671849 | bayes_pls_golite062009 |
| protein binding | 0.162885453822356 | bayes_pls_golite062009 |
| kinase activity | 0.10314500262782 | bayes_pls_golite062009 |
