| Protein: | YNTB_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 502 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNTB_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..24] | [502..25] |
|
|
250.0 | [0..17] | [502..93] |
|
|
250.0 | [0..12] | [501..1159] |
|
|
236.0 | [0..25] | [501..2] |
|
|
229.0 | [0..12] | [501..229] |
|
|
225.0 | [0..12] | [501..217] |
|
|
222.0 | [0..17] | [415..55] |
|
|
221.0 | [0..17] | [415..93] |
|
|
221.0 | [0..17] | [420..93] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MYTCPKTCTL TLKFFIDRFH TDYRLSKLAI SFFDQKKNKM ADSIPVKKKG SAKGPPSFVT 60
61 PEYIEKQRQK KLEKMAKKAA RKPIAPPSNA PPEFNTDFIK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [101-413] |
1 11 21 31 41 51
| | | | | |
1 REMLSIPNYA PFETEKSALD ITIMTYNVLA QTNIRRSMFP HSGEALKWKN RSRMLANELT 60
61 YYSPTLGCMQ EVDAEFVPNF YKKLLGGLGY ELHFIKGEGK THGIMIFWKS SLFKKVQDLT 120
121 IYYDDHDELP GRMNTKNIGC CVRLERVDDP SRGLFLATTH LFWHPYGSYE RLRQGAILVK 180
181 EVNKMAQSHP SWPVFIAGDF NTEPFDTNFP ALTTRPLSIC QRATDIIERS MNYVFGESEL 240
241 EEKNASTKTE NDSNEDDKEE CQSSSTSSVP ESTASTPKKR ILHVQNDYVP HYRSFYQQHE 300
301 QNPVLFSLYS VGY
|
| Detection Method: | |
| Confidence: | 37.30103 |
| Match: | 1akoA |
| Description: | EXONUCLEASE III FROM ESCHERICHIA COLI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on ester bonds | 1.79712722403488 | bayes_pls_golite062009 |
| catalytic activity | 1.76511376991978 | bayes_pls_golite062009 |
| DNA binding | 1.37658575624902 | bayes_pls_golite062009 |
| nuclease activity | 1.32173587797854 | bayes_pls_golite062009 |
| nucleic acid binding | 1.27522193028878 | bayes_pls_golite062009 |
| transcription regulator activity | 1.27444635886918 | bayes_pls_golite062009 |
| hydrolase activity | 1.26623219005539 | bayes_pls_golite062009 |
| binding | 1.15309487870289 | bayes_pls_golite062009 |
| exonuclease activity | 1.00241970456165 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.921825229691632 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.918937034405287 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.483115797781113 | bayes_pls_golite062009 |
| phosphatase activity | 0.384661571898828 | bayes_pls_golite062009 |
| protein binding | 0.245431403492424 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.234646673057692 | bayes_pls_golite062009 |
| inositol or phosphatidylinositol phosphatase activity | 0.228910502815798 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.218294880470342 | bayes_pls_golite062009 |
| transcription activator activity | 0.110687210838864 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.0749803326585898 | bayes_pls_golite062009 |
| transcription factor binding | 0.0509794286384297 | bayes_pls_golite062009 |
|
Region A: Residues: [414-502] |
1 11 21 31 41 51
| | | | | |
1 KLVHPENAKN TFDHPAFTNW AHAYQGHLDY IFVMNRDTSL QTPENQVVEG IKLKALLRVP 60
61 LPSEMKEAEP LEGRYPSDHV ALMANVQIV
|
| Detection Method: | |
| Confidence: | 1.7 |
| Match: | 2ddrA |
| Description: | No description for 2ddrA was found. |
