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View Structure Prediction Details

Protein: MU160_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MU160_SCHPO.

Description E-value Query
Range		 Subject
Range
ATXN10 - ataxin 10
gi|123993129, gi... - gi|124000121|gb|ABM87569.1| ataxin 10 [synthetic construct], gi|123993129|gb|ABM84166.1| ataxin 10 [...
 471.0 [0..11] [426..74]
ATX10_PONAB - Ataxin-10 OS=Pongo abelii GN=ATXN10 PE=2 SV=1
gi|55726464 - gi|55726464|emb|CAH90001.1| hypothetical protein [Pongo abelii]
 471.0 [0..11] [426..75]
gi|114686960 - gi|114686960|ref|XP_525623.2| PREDICTED: hypothetical protein [Pan troglodytes]
 468.0 [0..11] [426..49]
ATX10_MACFA - Ataxin-10 OS=Macaca fascicularis GN=ATXN10 PE=2 SV=1
gi|109094541 - gi|109094541|ref|XP_001110207.1| PREDICTED: ataxin 10 [Macaca mulatta]
 467.0 [0..11] [426..74]
ATX10_RAT - Ataxin-10 OS=Rattus norvegicus GN=Atxn10 PE=1 SV=1
 456.0 [0..11] [425..74]
ATX10_MOUSE - Ataxin-10 OS=Mus musculus GN=Atxn10 PE=1 SV=2
 438.0 [0..11] [425..74]
gi|73968909 - gi|73968909|ref|XP_857038.1| PREDICTED: similar to Ataxin-10 (Spinocerebellar ataxia type 10 protein...
 437.0 [0..11] [429..74]

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Predicted Domain #1
Region A:
Residues: [1-431] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTEEWEAL LSSSSNGDEL TMKLIRNGLA KGFKSQKAAG DAGLYSRFLP YHFTESVSND  60
   61 SFSSLPWQIF ANSVAGNSPL QNEAWAFLMD NEDFFLPVPM NPAQCTALEI ALWSLIRVDD 120
  121 QRLFELCHSK SGIRLLSIIF DFDSHPDWLR EDVMFNIAER ILKSNFPNVL VNVASKIGPK 180
  181 SIYFLIDCMS HKIKLKETAT GFYVILDVLS CVGRQFASVL EECFTKEISS AGLDHINHFS 240
  241 EIVMLGVDLL YRDYVSYDTT ISLKNDDSSS LGDMEFETSQ PSSSISEIIH LLAVLDKRIP 300
  301 KKTLVEKTYA SSMELQELYN AVVGVKRECV RFIAFICSKF STAPDLVRHF NGVALIISQA 360
  361 NYDDWNPYIR EISVLCTRLL LQNNIENQKI IGGLTPITTT HSDALEEAGF TSYINDKGKV 420
  421 VLQPKTAKNS H

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.25
Match: 1wa5B
Description: Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.58234592639151 bayes_pls_golite062009
protein binding 0.40342012399316 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle