| Protein: | HA2B_MOUSE |
| Organism: | Mus musculus |
| Length: | 256 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HA2B_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
312.0 | [0..2] | [254..91] |
|
|
309.0 | [0..3] | [253..92] |
|
|
309.0 | [0..3] | [254..84] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MPRSRALILG VLALTTMLSL CGGEDDIEAD HVGTYGISVY QSPGDIGQYT FEFDGDELFY 60
61 VDLDKKETVW MLPEFGQLAS FDPQGGLQNI AVVKHNLGVL TKRSNSTPAT NEAPQATVFP 120
121 KSPVLLGQPN TLICFVDNIF PPVINITWLR NSKSVADGVY ETSFFVNRDY SFHKLSYLTF 180
181 IPSDDDIYDC KVEHWGLEEP VLKHWEPEIP APMSELTETV VCALGLSVGL VGIVVGTIFI 240
241 IQGLRSGGTS RHPGPL
|
| Detection Method: |  |
| Confidence: | 53.221849 |
| Match: | 1iakA |
| Description: | Class II MHC alpha chain, C-terminal domain; Class II MHC alpha chain, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptide antigen binding | 11.0753660234769 | bayes_pls_golite062009 |
| olfactory receptor activity | 8.50611980376815 | bayes_pls_golite062009 |
| antigen binding | 7.67141746788228 | bayes_pls_golite062009 |
| endogenous lipid antigen binding | 3.6120042602684 | bayes_pls_golite062009 |
| MHC class I receptor activity | 3.46497995701625 | bayes_pls_golite062009 |
| receptor activity | 3.04238248088254 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.91649681515985 | bayes_pls_golite062009 |
| natural killer cell lectin-like receptor binding | 2.87337850935774 | bayes_pls_golite062009 |
| signal transducer activity | 2.59970257426838 | bayes_pls_golite062009 |
| molecular transducer activity | 2.59970257426838 | bayes_pls_golite062009 |
| IgG binding | 2.59905791929203 | bayes_pls_golite062009 |
| protein binding | 2.20481087437436 | bayes_pls_golite062009 |
| binding | 2.11682283742138 | bayes_pls_golite062009 |
| lipid antigen binding | 2.09050740693882 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.37360564853216 | bayes_pls_golite062009 |
| growth factor binding | 1.1520564031101 | bayes_pls_golite062009 |
| IgG receptor activity | 1.15013317153047 | bayes_pls_golite062009 |
| receptor binding | 0.96769592478452 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 0.962566971314929 | bayes_pls_golite062009 |
| exogenous lipid antigen binding | 0.763929387638141 | bayes_pls_golite062009 |
| coreceptor activity | 0.661209696849389 | bayes_pls_golite062009 |
| IgE receptor activity | 0.54373753879821 | bayes_pls_golite062009 |
| IgE binding | 0.54373753879821 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.4860421936 | bayes_pls_golite062009 |
| MHC class II receptor activity | 0.251167772391909 | bayes_pls_golite062009 |
| peptide binding | 0.2334349814724 | bayes_pls_golite062009 |
