| Protein: | ASCL3_MOUSE |
| Organism: | Mus musculus |
| Length: | 174 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASCL3_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
140.0 | [0..1] | [174..1] |
|
|
123.0 | [0..1] | [164..2] |
|
|
122.0 | [0..1] | [164..1] |
|
|
122.0 | [0..1] | [164..2] |
|
|
109.0 | [0..11] | [172..16] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MDTRSYPSPP DRLSVFAESA HLPLSRPFYL DPMVTVHLCP ETPVPASYTD ELPLLPFSSD 60
61 TLIMNNYGDP YPFPFPMPYT NYR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.216 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.237 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.238 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.492 | a.60.8 | HRDC-like |
| View | Download | 0.271 | a.36.1 | Signal peptide-binding domain |
|
Region A: Residues: [84-174] |
1 11 21 31 41 51
| | | | | |
1 RCDYTYGPAF IRKRNERERQ RVKCVNEGYA RLRRHLPEDY LEKRLSKVET LRAAIKYISY 60
61 LQSLLYPDES ETKKNPRTAS CGSLDPALRV I
|
| Detection Method: | |
| Confidence: | 14.09691 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| transcription activator activity | 2.5495467409976 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.31910036997977 | bayes_pls_golite062009 |
| protein binding | 1.59929864805879 | bayes_pls_golite062009 |
| promoter binding | 1.56457725225443 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.39260472877067 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.3655541712365 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.29436315000437 | bayes_pls_golite062009 |
