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View Structure Prediction Details

Protein: MAX_MOUSE
Organism: Mus musculus
Length: 160 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAX_MOUSE.

Description E-value Query
Range
Subject
Range
gi|38173806 - gi|38173806|gb|AAH60838.1| ARNT protein [Homo sapiens]
118.0 [0..1] [160..67]
gi|110331805 - gi|110331805|gb|ABG67008.1| aryl hydrocarbon receptor nuclear translocator [Bos taurus]
117.0 [0..1] [160..67]
gi|108882568, gi... - gi|157126327|ref|XP_001654596.1| circadian protein clock/arnt/bmal/pas [Aedes aegypti], gi|108882568...
117.0 [0..2] [160..7]
gi|114559354 - gi|114559354|ref|XP_001170422.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1...
117.0 [0..1] [160..67]
gi|73981351 - gi|73981351|ref|XP_861248.1| PREDICTED: similar to Aryl hydrocarbon receptor nuclear translocator (A...
117.0 [0..1] [160..67]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNDDIEVE SDEEQARFQS AADKRAHHNA LERKRRDHIK DSFHSLRDSV PSLQGEKASR  60
   61 AQILDKATEY IQYMRRKNDT HQQDIDDLKR QNAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 1r05A
Description: Solution Structure of Max B-HLH-LZ
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transcription regulator activity 5.38658950816179 bayes_pls_golite062009
DNA binding 5.18654839258297 bayes_pls_golite062009
nucleic acid binding 5.05768805749761 bayes_pls_golite062009
transcription factor activity 4.78039531631248 bayes_pls_golite062009
binding 3.81829206350975 bayes_pls_golite062009
RNA polymerase II transcription factor activity 3.39500382187264 bayes_pls_golite062009
transcription factor binding 2.61163564741984 bayes_pls_golite062009
transcription activator activity 2.5495467409976 bayes_pls_golite062009
sequence-specific DNA binding 2.31910036997977 bayes_pls_golite062009
RNA polymerase II transcription factor activity, enhancer binding 2.22731296211498 bayes_pls_golite062009
protein binding 1.59929864805879 bayes_pls_golite062009
transcription cofactor activity 1.52770895937238 bayes_pls_golite062009
transcription repressor activity 0.955588849035129 bayes_pls_golite062009
transcription corepressor activity 0.801830750183111 bayes_pls_golite062009
promoter binding 0.68523657427264 bayes_pls_golite062009
transcription coactivator activity 0.3513586903977 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [95-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEQQVRALEK ARSSAQLQTN YPSSDNSLYT NAKGGTISAF DGGSDSSSES EPEEPQSRKK  60
   61 LRMEAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle