YRC Public Data Repository - Protein Structure Prediction

Protein:	MRPL32
Organism:	Homo sapiens
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPL32.

Description	E-value	Query Range	Subject Range
gi\|109505037, gi... - gi\|109505870\|ref\|XP_001054992.1\| PREDICTED: similar to mitochondrial ribosomal protein L32 [Rattus n...	3.0E-70	[13..188]	[85..260]
gi\|114613028 - gi\|114613028\|ref\|XP_528025.2\| PREDICTED: mitochondrial ribosomal protein L32 [Pan troglodytes]	3.0E-70	[1..188]	[1..188]
gi\|109066747 - gi\|109066747\|ref\|XP_001097622.1\| PREDICTED: similar to mitochondrial ribosomal protein L32 [Macaca m...	4.0E-70	[1..188]	[1..188]
RM32_MOUSE - 39S ribosomal protein L32, mitochondrial OS=Mus musculus GN=Mrpl32 PE=1 SV=1	4.0E-69	[13..188]	[12..187]
RM32_BOVIN - 39S ribosomal protein L32, mitochondrial OS=Bos taurus GN=MRPL32 PE=2 SV=1	1.0E-65	[1..188]	[1..188]
gi\|57099049 - gi\|57099049\|ref\|XP_533077.1\| PREDICTED: similar to mitochondrial ribosomal protein L32 [Canis famili...	4.0E-61	[1..188]	[1..188]
gi\|6841216 - gi\|6841216\|gb\|AAF28961.1\|AF161401_1 HSPC283 [Homo sapiens]	6.0E-55	[44..188]	[39..183]
gi\|50733012 - gi\|50733012\|ref\|XP_418869.1\| PREDICTED: similar to Mitochondrial ribosomal protein L32 [Gallus gallu...	3.0E-47	[5..188]	[1..184]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAMLVLVV SPWSAARGVL RNYWERLLRK LPQSRPGFPS PPWGPALAVQ GPAMFTEPAN  60
   61 DTSGSKENSS LLDSIFWMAA PKNRRTIEVN RCRRRNPQKL IKVKNNIDVC PECGHLKQKH 120
  121 VLCAYCYEKV CKETAEIRRQ IGKQEGGPFK APTIETVVLY TGETPSEQDQ GKRIIERDRK 180
  181 RPSWFTQN

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.0
Match:	1j5aM
Description:	50S subunit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
structural constituent of ribosome	9.67761199764219	bayes_pls_golite062009
structural molecule activity	9.13063837111868	bayes_pls_golite062009
binding	0.793081751515531	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: