| Protein: | HNRNPR |
| Organism: | Homo sapiens |
| Length: | 633 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HNRNPR.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-66 | [1..633] | [106..738] |
|
|
2.0E-66 | [1..633] | [1..633] |
|
|
2.0E-65 | [1..633] | [161..793] |
|
|
2.0E-65 | [1..633] | [1..632] |
|
|
2.0E-65 | [1..633] | [1..636] |
|
|
3.0E-65 | [1..633] | [1..632] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MANQVNGNAV QLKEEEEPMD TSSVTHTEHY KTLIEAGLPQ KVAERLDEIF QTGLVAYVDL 60
61 DERAIDALRE FNEEGALSVL QQFKESDLSH VQNKSAFLCG VMKTYRQREK QGSKVQESTK 120
121 GPDEAKIKAL LERTGYTLDV TTGQRKYGGP PPDSVYSG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [159-251] |
1 11 21 31 41 51
| | | | | |
1 VQPGIGTEVF VGKIPRDLYE DELVPLFEKA GPIWDLRLMM DPLSGQNRGY AFITFCGKEA 60
61 AQEAVKLCDS YEIRPGKHLG VCISVANNRL FVG
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 2dguA |
| Description: | No description for 2dguA was found. |
|
Region A: Residues: [252-426] |
1 11 21 31 41 51
| | | | | |
1 SIPKNKTKEN ILEEFSKVTE GLVDVILYHQ PDDKKKNRGF CFLEYEDHKS AAQARRRLMS 60
61 GKVKVWGNVV TVEWADPVEE PDPEVMAKVK VLFVRNLATT VTEEILEKSF SEFGKLERVK 120
121 KLKDYAFVHF EDRGAAVKAM DEMNGKEIEG EEIEIVLAKP PDKKRKERQA ARQAS
|
| Detection Method: | |
| Confidence: | 5.29 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
|
Region A: Residues: [427-633] |
1 11 21 31 41 51
| | | | | |
1 RSTAYEDYYY HPPPRMPPPI RGRGRGGGRG GYGYPPDYYG YEDYYDDYYG YDYHDYRGGY 60
61 EDPYYGYDDG YAVRGRGGGR GGRGAPPPPR GRGAPPPRGR AGYSQRGAPL GPPRGSRGGR 120
121 GGPAQQQRGR GSRGSRGNRG GNVGGKRKAD GYNQPDSKRR QTNNQQNWGS QPIAQQPLQQ 180
181 GGDYSGNYGY NNDNQEFYQD TYGQQWK
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
