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View Structure Prediction Details

Protein: MRPS22
Organism: Homo sapiens
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS22.

Description E-value Query
Range
Subject
Range
gi|109049091 - gi|109049091|ref|XP_001113756.1| PREDICTED: mitochondrial ribosomal protein S22 isoform 6 [Macaca mu...
649.0 [0..1] [360..1]
gi|55727194 - gi|55727194|emb|CAH90353.1| hypothetical protein [Pongo abelii]
gi|197098546 - gi|197098546|ref|NP_001125170.1| mitochondrial ribosomal protein S22 [Pongo abelii]
645.0 [0..1] [360..1]
gi|114589458 - gi|114589458|ref|XP_001157957.1| PREDICTED: mitochondrial ribosomal protein S22 isoform 4 [Pan trogl...
643.0 [0..1] [360..1]
RT22_MOUSE - 28S ribosomal protein S22, mitochondrial OS=Mus musculus GN=Mrps22 PE=1 SV=1
601.0 [0..1] [360..1]
gi|73990292 - gi|73990292|ref|XP_852337.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S22 (S22mt) (...
586.0 [0..1] [360..1]
gi|117606268, gi... - gi|117606268|ref|NP_001070998.1| hypothetical protein LOC683519 [Rattus norvegicus], gi|114205514|gb...
582.0 [0..1] [360..1]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLGTTVLL WSLLRSSPGV ERVCFRARIQ PWHGGLLQPL PCSFEMGLPR RRFSSEAAES  60
   61 GSPETKKPTF MDEEVQSILT KMTGLNLQKT FKPAIQELKP PTYKLMTQAQ LEEATRQAVE 120
  121 AAKVRLKMPP VLEERVPIND VLAEDKILEG TETTKYVFTD ISYSIPH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [168-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RERFIVVREP SGTLRKASWE ERDRMIQVYF PKEGRKILTP IIFKEENLRT MYSQDRHVDV  60
   61 LNLCFAQFEP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [238-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSTEYIKVHH KTYEDIDKRG KYDLLRSTRY FGGMVWYFVN NKKIDGLLID QIQRDLIDDA  60
   61 TNLVQLYHVL HPDGQSAQGA KDQAAEGINL IKVFAKTEAQ KGAYIELTLQ TYQEALSRHS 120
  121 AAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle