YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MRPS22
Organism: Homo sapiens
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS22.

Description E-value Query
Range
Subject
Range
gi|109049091 - gi|109049091|ref|XP_001113756.1| PREDICTED: mitochondrial ribosomal protein S22 isoform 6 [Macaca mu...
649.0 [0..1] [360..1]
gi|55727194 - gi|55727194|emb|CAH90353.1| hypothetical protein [Pongo abelii]
gi|197098546 - gi|197098546|ref|NP_001125170.1| mitochondrial ribosomal protein S22 [Pongo abelii]
645.0 [0..1] [360..1]
gi|114589458 - gi|114589458|ref|XP_001157957.1| PREDICTED: mitochondrial ribosomal protein S22 isoform 4 [Pan trogl...
643.0 [0..1] [360..1]
RT22_MOUSE - 28S ribosomal protein S22, mitochondrial OS=Mus musculus GN=Mrps22 PE=1 SV=1
601.0 [0..1] [360..1]
gi|73990292 - gi|73990292|ref|XP_852337.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S22 (S22mt) (...
586.0 [0..1] [360..1]
gi|117606268, gi... - gi|117606268|ref|NP_001070998.1| hypothetical protein LOC683519 [Rattus norvegicus], gi|114205514|gb...
582.0 [0..1] [360..1]

Back

Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLGTTVLL WSLLRSSPGV ERVCFRARIQ PWHGGLLQPL PCSFEMGLPR RRFSSEAAES  60
   61 GSPETKKPTF MDEEVQSILT KMTGLNLQKT FKPAIQELKP PTYKLMTQAQ LEEATRQAVE 120
  121 AAKVRLKMPP VLEERVPIND VLAEDKILEG TETTKYVFTD ISYSIPH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [168-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RERFIVVREP SGTLRKASWE ERDRMIQVYF PKEGRKILTP IIFKEENLRT MYSQDRHVDV  60
   61 LNLCFAQFEP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.632 N/A N/A a.77.1 DEATH domain
View Download 0.605 N/A N/A a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.605 N/A N/A a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.528 N/A N/A a.60.1 SAM/Pointed domain
View Download 0.528 N/A N/A a.60.1 SAM/Pointed domain
View Download 0.460 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.419 N/A N/A d.58.7 RNA-binding domain, RBD
View Download 0.366 N/A N/A a.4.5 "Winged helix" DNA-binding domain

Predicted Domain #3
Region A:
Residues: [238-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSTEYIKVHH KTYEDIDKRG KYDLLRSTRY FGGMVWYFVN NKKIDGLLID QIQRDLIDDA  60
   61 TNLVQLYHVL HPDGQSAQGA KDQAAEGINL IKVFAKTEAQ KGAYIELTLQ TYQEALSRHS 120
  121 AAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.667 N/A N/A a.118.8 TPR-like
View Download 0.643 N/A N/A a.24.21 Description not found.
View Download 0.638 N/A N/A a.29.4 RecG, N-terminal domain
View Download 0.579 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.531 N/A N/A a.24.19 Description not found.
View Download 0.526 N/A N/A a.186.1 Description not found.
View Download 0.467 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.369 N/A N/A f.1.4 Bcl-2 inhibitors of programmed cell death


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle