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View Structure Prediction Details

Protein: add-2
Organism: Caenorhabditis elegans
Length: 294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for add-2.

Description E-value Query
Range
Subject
Range
add-2 - adducin status:Confirmed UniProt:Q20952 protein_id:CAB00100.1
299.0 [0..1] [294..318]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSAGVISTA TVPAPMFHPH ITPIADLKDD DGYDPEELTQ RNKLASLYRL VDLFRWSQGI  60
   61 YNHITVRVST DPDEILINAF GQLYSEVSAS SLIKVDLDGT VIDGGSTNFG VNQAGYVLHS 120
  121 AIHNGRPEVK CVVHLHHPSV VAVSAQKCGL LPISQESMIV GDVGYHEYRG ILIDEAERAL 180
  181 LVRDLGDRNV MILRNHGFVV CGESIEHALS LTYHLIIACE TQIRTVPGGN TDNVHFPAQS 240
  241 AIKQVYKVAS QGGGGVNRQN GHVNSMQWKK GELEWQAYMR QLDAQGYVTG NVPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.39794
Match: 1dzyP
Description: L-fuculose-1-phosphate aldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.58067730905989 bayes_pls_golite062009
binding 1.02928844080554 bayes_pls_golite062009
protein binding 0.424505568216234 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle