| Protein: | gi|6013006, gi|3... |
| Organism: | Homo sapiens |
| Length: | 491 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6013006, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..491] | [339..830] |
|
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0.0 | [1..491] | [1..491] |
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0.0 | [1..491] | [1..491] |
|
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0.0 | [1..491] | [1..491] |
|
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0.0 | [1..491] | [1..491] |
|
|
0.0 | [1..491] | [1..491] |
|
|
0.0 | [1..491] | [1..491] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MSLKSERRGI HVDQSDLLCK KGCGYYGNPA WQGFCSKCWR EEYHKARQKQ IQEDWELAER 60
61 LQREEEEAFA SSQSSQGAQS LTFSKFEEKK TNEKTRKVT
|
| Detection Method: |  |
| Confidence: | 18.30103 |
| Match: | 2c7mA |
| Description: | human Rabex-5 residues 1-74 in complex with Ubiquitin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [100-395] |
1 11 21 31 41 51
| | | | | |
1 TVKKFFSASS RVGSKKEIQE AKAPSPSINR QTSIETDRVS KEFIEFLKTF HKTGQEIYKQ 60
61 TKLFLEGMHY KRDLSIEEQS ECAQDFYHNV AERMQTRGKV PPERVEKIMD QIEKYIMTRL 120
121 YKYVFCPETT DDEKKDLAIQ KRIRALRWVT PQMLCVPVNE DIPEVSDMVV KAITDIIEMD 180
181 SKRVPRDKLA CITKCSKHIF NAIKITKNEP ASADDFLPTL IYIVLKGNPP RLQSNIQYIT 240
241 RFCNPSRLMT GEDGYYFTNL CCAVAFIEKL DAQSLNLSQE DFDRYMSGQT SPRKQE
|
| Detection Method: | |
| Confidence: | 89.221849 |
| Match: | 1txuA |
| Description: | Crystal Structure of the Vps9 Domain of Rabex-5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.248690472541603 | bayes_pls_golite062009 |
|
Region A: Residues: [396-491] |
1 11 21 31 41 51
| | | | | |
1 AESWSPDACL GVKQMYKNLD LLSQLNERQE RIMNEAKKLE KDLIDWTDGI AREVQDIVEK 60
61 YPLEIKPPNQ PLAAIDSENV ENDKLPPPLQ PQVYAG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
