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View Structure Prediction Details

Protein: MTERF
Organism: Homo sapiens
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTERF.

Description E-value Query
Range
Subject
Range
gi|123994931 - gi|123994931|gb|ABM85067.1| mitochondrial transcription termination factor [synthetic construct]
gi|12654289 - gi|12654289|gb|AAH00965.1| Mitochondrial transcription termination factor, precursor [Homo sapiens]
358.0 [0..1] [399..1]
gi|114614414, gi... - gi|114614418|ref|XP_001165566.1| PREDICTED: mitochondrial transcription termination factor isoform 2...
355.0 [0..1] [399..1]
MTERF_PONPY - Transcription termination factor, mitochondrial precursor - Pongo pygmaeus (Orangutan)
MTEF1_PONAB - Transcription termination factor 1, mitochondrial OS=Pongo abelii GN=MTERF1 PE=2 SV=1
345.0 [0..1] [399..1]
gi|109067551 - gi|109067551|ref|XP_001092039.1| PREDICTED: mitochondrial transcription termination factor [Macaca m...
345.0 [0..1] [399..89]
MTEF1_RAT - Transcription termination factor 1, mitochondrial OS=Rattus norvegicus GN=Mterf1 PE=1 SV=1
316.0 [0..21] [396..1]
MTF1B_MOUSE - Transcription termination factor 1b, mitochondrial OS=Mus musculus GN=Mterf1b PE=2 SV=1
314.0 [0..21] [395..1]
gi|115305154 - gi|115305154|gb|AAI23559.1| MTERF protein [Bos taurus]
303.0 [0..5] [395..41]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLSLGQTS ISKGLNYLTI MAPGNLWHMR NNFLFGSRCW MTRFSAENIF KSVSFRLFGV  60
   61 KCHNTDSEPL KNEDLLKNLL TMGVDIDMAR KRQPGVFHRM IT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEQDLKMFLL SKGASKEVIA SIISRYPRAI TRTPENLSKR WDLWRKIVTS DLEIVNILER  60
   61 SPESFFRSNN NLNLENNIKF LYSVGLTRKC LCRLLTNAPR TFSNSLDLNK QMVEFLQAAG 120
  121 LSLGHNDPAD FVRKIIFKNP FILI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSTKRVKANI EFLRSTFNLN SEELLVLICG PGAEILDLSN DYARRSYANI KEKLFSLGCT  60
   61 EEEVQKFVLS YPDVIFLAEK KFNDKIDCLM EENISISQII ENPRVLDSSI STLKSRIKEL 120
  121 VNAGCNLSTL NITLLSWSKK RYEAKLKKLS RFA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle