| Protein: | RPF1 |
| Organism: | Homo sapiens |
| Length: | 349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..349] | [1..349] |
|
|
1.0E-98 | [1..349] | [1..349] |
|
|
1.0E-97 | [1..349] | [1..349] |
|
|
2.0E-97 | [1..349] | [1..349] |
|
|
1.0E-95 | [22..349] | [40..367] |
|
|
1.0E-95 | [42..349] | [259..566] |
|
|
4.0E-94 | [33..349] | [33..349] |
|
|
3.0E-93 | [1..349] | [1..349] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MAKAGDKSSS SGKKSLKRKA AAEELQEAAG AGDGATENGV QPPKAAAFPP GFSISEIKNK 60
61 QRRHLMFTRW KQQQRKEKLA AKKKLKKERE ALGDKAPPKP VPKTIDNQRV YDETTVDPND 120
121 EEVAYDE
|
| Detection Method: |  |
| Confidence: | 4.045757 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [128-237] |
1 11 21 31 41 51
| | | | | |
1 ATDEFASYFN KQTSPKILIT TSDRPHGRTV RLCEQLSTVI PNSHVYYRRG LALKKIIPQC 60
61 IARDFTDLIV INEDRKTPNG LILSHLPNGP TAHFKMSSVR LRKEIKRRGK
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.58650371779212 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.58624422951947 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.58624422951947 | bayes_pls_golite062009 |
| ligase activity | 2.44518871945794 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.78917266819015 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.665778090365515 | bayes_pls_golite062009 |
|
Region A: Residues: [238-349] |
1 11 21 31 41 51
| | | | | |
1 DPTEHIPEII LNNFTTRLGH SIGRMFASLF PHNPQFIGRQ VATFHNQRDY IFFRFHRYIF 60
61 RSEKKVGIQE LGPRFTLKLR SLQKGTFDSK YGEYEWVHKP REMDTSRRKF HL
|
| Detection Method: | |
| Confidence: | 1.94 |
| Match: | 1w94A |
| Description: | Crystal Structure of Mil (Mth680), an archaeal Imp4-like protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.23050104849399 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.23042563163442 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.23042563163442 | bayes_pls_golite062009 |
| ligase activity | 2.20075885212185 | bayes_pls_golite062009 |
| binding | 1.79619860046184 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 1.61792117479721 | bayes_pls_golite062009 |
| catalytic activity | 0.853948963582441 | bayes_pls_golite062009 |
| protein binding | 0.668055564043996 | bayes_pls_golite062009 |
