| Protein: | gi|14141159, gi|... |
| Organism: | Homo sapiens |
| Length: | 331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14141159, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-47 | [3..330] | [86..449] |
|
|
4.0E-47 | [3..330] | [86..453] |
|
|
6.0E-47 | [3..330] | [86..449] |
|
|
6.0E-47 | [3..330] | [86..449] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MDWVMKHNGP NDASDGTVRL RGLPFGCSKE EIVQFFQGLE IVPNGITLTM DYQGRSTGEA 60
61 FVQFASKEIA ENALGKHKER IGHRYIEIFR SSRSEIKGFY DPP
|
| Detection Method: |  |
| Confidence: | 12.221849 |
| Match: | 1wg5A |
| Description: | Solution structure of the first RRM domain in heterogeneous nuclear ribonucleoprotein H |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [104-331] |
1 11 21 31 41 51
| | | | | |
1 RRLLGQRPGP YDRPIGGRGG YYGAGRGSYG GFDDYGGYNN YGYGNDGFDD RMRDGRGMGG 60
61 HGYGGAGDAS SGFHGGHFVH MRGLPFRATE NDIANFFSPL NPIRVHIDIG ADGRATGEAD 120
121 VEFVTHEDAV AAMSKDKNNM QHRYIELFLN STPGGGSGMG GSGMGGYGRD GMDNQGGYGS 180
181 VGRMGMGNNY SGGYGTPDGL GGYGRGGGGS GGYYGQGGMS GGGWRGMY
|
| Detection Method: | |
| Confidence: | 4.06 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
