| Protein: | gi|4938296, gi|2... |
| Organism: | Homo sapiens |
| Length: | 290 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4938296, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-50 | [1..290] | [1..296] |
|
|
2.0E-49 | [1..290] | [1..295] |
|
|
2.0E-48 | [1..290] | [1..283] |
|
|
3.0E-48 | [1..290] | [1..291] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MSLKLQASNV TNKNDPKSIN SRVFIGNLNT ALVKKSDVET IFSKYGRVAG CSVHKGYAFV 60
61 QYSNERHARA AVLGENGRVL AGQTLDINMA GEPKP
|
| Detection Method: |  |
| Confidence: | 18.30103 |
| Match: | 1wf1A |
| Description: | Solution structure of RRM domain in RNA-binding protein NP_057951 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.96087565414382 | bayes_pls_golite062009 |
| binding | 2.29041217255208 | bayes_pls_golite062009 |
| nucleic acid binding | 1.91189490017911 | bayes_pls_golite062009 |
| mRNA binding | 1.52245536665132 | bayes_pls_golite062009 |
| protein binding | 0.0101134374085809 | bayes_pls_golite062009 |
|
Region A: Residues: [96-290] |
1 11 21 31 41 51
| | | | | |
1 DRPKGLKRAA SAIYRLFDYR GRLSPVPVPR AVPVKRPRVT VPLVRRVKTN VPVKLFARST 60
61 AVTTSSAKIK LKSSELQAIK TELTQIKSNI DALLSRLEQI AAEQKANPDG KKKGDGGGAG 120
121 GGGGGGGSGG GGSGGGGGGG SSRPPAPQEN TTSEAGLPQG EARTRDDGDE EGLLTHSEEE 180
181 LEHSQDTDAD DGALQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
