| Protein: | RBS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 488 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..488] | [1..488] |
|
|
0.0 | [35..488] | [4..457] |
|
|
1.0E-79 | [21..269] | [130..406] |
|
|
5.0E-40 | [39..207] | [21..223] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MRVSLSVSSF FHIQLDKFWR RQLSHIVPAS RGDTLDSRNW GLTPAMETGL FQKPQDRIFI 60
61 IELENSIVSF INSNTESFQL RPMNSYYRLL SHQIAEYHNL NHVLARTQDS CVILFKGENF 120
121
|
| Detection Method: |  |
| Confidence: | 12.638272 |
| Match: | PF01424 |
| Description: | R3H domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [121-225] |
1 11 21 31 41 51
| | | | | |
1 QKIEGKPLLQ ELQLNKKPEE CASSSESIEK SNNNRIFRIL KRKEVGNECD YKIDGNTRTP 60
61 NSNLTANSNK DQKIEIDDKS STDLEQERIE KERLYEQRKQ EIFDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [226-488] |
1 11 21 31 41 51
| | | | | |
1 LNKSEDDVKS TNSSGSSDSD NEWSDWLNGD DSNTQTSNGS VSSSSPFNSS VTTIQVNKPQ 60
61 QQFYDSRRGR GGRRRGTNNY KDAYRGQSRR NKENGGYQSG YSSPYLVYPP PQMGGNSLPT 120
121 YPLMYNPAGP APGPAPSPMV MGNNTVFMNP YMYNMNPQGS CSFGTPIPMY PPYQYQYQYQ 180
181 YNTQYHSGPY SNTPSYNSNN YTRSSANKYH HFQGKNSYSG AIPKRSDDSN SNKNEGIRRA 240
241 SVEGSPSSRD TDSVEMKFDK LNI
|
| Detection Method: | |
| Confidence: | 9.91 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
