YRC Public Data Repository - Protein Structure Prediction

Protein:	NAT3
Organism:	Saccharomyces cerevisiae
Length:	251 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT3.

Description	E-value	Query Range	Subject Range
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	2.0E-64	[1..251]	[1..251]
gi\|148677471, gi... - gi\|30519923\|ref\|NP_848719.1\| hypothetical protein LOC28062 [Mus musculus], gi\|16507923\|gb\|AAH14770.1... tr\|M0R635\|M0R635_RAT - Protein LOC100909833 OS=Rattus norvegicus GN=LOC100909833 PE=4 SV=1	2.0E-43	[58..242]	[1..177]
gi\|33871453 - gi\|33871453\|gb\|AAH04552.2\| ARD1B protein [Homo sapiens]	6.0E-43	[58..242]	[47..223]
gi\|190408055 - gi\|190408055\|gb\|EDV11320.1\| N-terminal acetyltransferase [Saccharomyces cerevisiae RM11-1a] NAT3_YEAST - N-terminal acetyltransferase B complex catalytic subunit NAT3 OS=Saccharomyces cerevisiae (strain AT... NAT3 - Catalytic subunit of the NatB N-terminal acetyltransferase, which catalyzes acetylation of the amino... gi\|151942905 - gi\|151942905\|gb\|EDN61251.1\| N-terminal acetyltransferase [Saccharomyces cerevisiae YJM789]	4.0E-40	[57..251]	[1..195]
gi\|182890674, gi... - gi\|47086985\|ref\|NP_998499.1\| alpha-N-acetyltransferase 1A [Danio rerio], gi\|31419462\|gb\|AAH53180.1\| ...	2.0E-37	[58..229]	[1..164]
gi\|147901790, gi... - gi\|28422354\|gb\|AAH44094.1\| Ard1-prov protein [Xenopus laevis], gi\|147901790\|ref\|NP_001080491.1\| N-ac...	3.0E-36	[58..232]	[1..168]
gi\|18379062, gi\|... - gi\|21536510\|gb\|AAM60842.1\| unknown [Arabidopsis thaliana], gi\|18379062\|ref\|NP_563677.1\| GCN5-related...	3.0E-36	[57..251]	[1..173]

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Predicted Domain #1

Region A:
Residues: [1-251]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGCLEMFGC YFMHVLFINI NVEAISNEVY IVHNIAYVKD SGTLRIFKER DRRIREMTTI  60
   61 QPFEPVDLFK TNNVNLDILT ENFPLEFYFE YMIIWPDLFF KSSEMTVDPT FKHNISGYMM 120
  121 AKTEGKTTEW HTHITAVTVA PRFRRISLAS KLCNTLETMT DVMPHEVNFI DLFVKCNNQL 180
  181 AIKLYEKLGY SVYRRVVGYY NSAEDGYPDT LKKVDDNKDA FDMRKAMARD RNRSVRPDGR 240
  241 SHKCYPHDVR F

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Detection Method:	PSI-BLAST
Confidence:	10.221849
Match:	1i1dA_
Description:	Glucosamine-phoshate N-acetyltransferase GNA1
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits