| Protein: | KAR9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 644 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAR9.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..644] | [1..644] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MDNDGPRSMT IGDDFQENFC ERLERIHNTL HSINDCNSLN ESTTSISETL LVQFYDDLEN 60
61 VASVIPDLVN KKRLGKDDIL LFMDWLLLKK YMLYQFISDV HNIEEGFAHL LDLLEDEFSK 120
121 DDQDSDKYNR FSPMFDVIEE STQIKTQLEP WLTNLKELLD TSLEFNEISK DHMDTLHKII 180
181 NSNISYCLEI QEERFASPIR HTPSFTLEQL VKLLGTHTET TEPKVPKFSP AEDILSRKFL 240
241 NLKKNIPPIE KSLTDILPQR IVQFGHRNIT NITTLQTILQ KKYELIMKDY RFMNSEFREL 300
301 KVELIDKRWN ILFINLNHEL LYILDEIERL QSKLLTTKYT K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| cytoskeletal protein binding | 5.50691080671938 | bayes_pls_golite062009 |
| actin binding | 5.20020808032372 | bayes_pls_golite062009 |
| actin filament binding | 4.56724410384698 | bayes_pls_golite062009 |
| tubulin binding | 3.64804975825589 | bayes_pls_golite062009 |
| microtubule binding | 3.62999428181677 | bayes_pls_golite062009 |
| binding | 2.3468119246528 | bayes_pls_golite062009 |
| protein binding | 2.03402581943916 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 1.75895219767628 | bayes_pls_golite062009 |
| integrin binding | 0.634559226589946 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.502792536769221 | bayes_pls_golite062009 |
| SNARE binding | 0.309596137075689 | bayes_pls_golite062009 |
| protein complex binding | 0.180823251423251 | bayes_pls_golite062009 |
|
Region A: Residues: [342-644] |
1 11 21 31 41 51
| | | | | |
1 DITIRLERQL ERKSKTVSKT FNIIYRALEF SLLDAGVASK TNELAQRWLN IKPTADKILI 60
61 KSSASNKIAT SKKKIPKPKS LGFGRPNSVI GTITQDFQER VAINEGDSNK TPENSTTVAL 120
121 KGKKLGKALL QKMNIKPATS PNSSNAINPF FDPESPNKGK LILSSVPPLP YDETDETTLR 180
181 VSRGENEKSP DSFITSRHEN KVQITETPLM AKNKSVLDIE KDKWNHYRSL PSRIPIYKDK 240
241 VVKVTVENTP IAKVFQTPPT KITTPNSQVW VPSTRRRTRL RPPTPLSQLL SPREGRLDKT 300
301 PTY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
