| Protein: | TYW1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 810 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYW1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..810] | [1..810] |
|
|
0.0 | [139..790] | [9..716] |
|
|
0.0 | [126..803] | [13..680] |
|
|
0.0 | [138..733] | [10..662] |
|
|
0.0 | [199..795] | [44..643] |
|
|
0.0 | [199..795] | [44..650] |
|
|
0.0 | [145..788] | [352..1056] |
|
|
0.0 | [206..790] | [57..646] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MDGFRVAGAL VVGALTAAYL YFGGRFSIAL VIIVGYGIYC NEASGGSQDS QEKLDLNKQQ 60
61 KKPCCSDKKI ADGGKKTGGC CSDKKNGGGK GGGCCSSKGG KKGGCCSSKG GKKGGCCSSK 120
121 KNI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [124-173] |
1 11 21 31 41 51
| | | | | |
1 GDNENTATEV EKAVNYPVTV DFTEVFRKPT KKRSSTPKVF SKNSSSNSRV
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 4nosA_ |
| Description: | Nitric oxide (NO) synthase oxygenase domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-388] |
1 11 21 31 41 51
| | | | | |
1 GKKLSVSKKI GPDGLIKSAL TISNETLLSS QIYVLYSSLQ GAASKAAKSV YDKLKELDEL 60
61 TNEPKLLNLD DLSDFDDYFI NVPVENALYV LVLPSYDIDC PLDYFLQTLE ENANDFRVDS 120
121 FPLRKLVGYT VLGLGDSESW PEKFCYQAKR ADHWISRLGG RRIFPLGKVC MKTGGSAKID 180
181 EWTSLLAETL KDDEPIIYEY DENADSEEDE EEGNG
|
| Detection Method: | |
| Confidence: | 67.39794 |
| Match: | 1j9zA_ |
| Description: | NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 0.62629924591908 | bayes_pls_golite062009 |
| binding | 0.523120840489436 | bayes_pls_golite062009 |
| catalytic activity | 0.275631658558537 | bayes_pls_golite062009 |
|
Region A: Residues: [389-445] |
1 11 21 31 41 51
| | | | | |
1 SDELGDVEDI GGKGSNGKFS GADEIKQMVA KDSPTYKNLT KQGYKVIGSH SGVKICR
|
| Detection Method: | |
| Confidence: | 67.39794 |
| Match: | 1j9zA_ |
| Description: | NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.48331922124015 | bayes_pls_golite062009 |
| transferase activity | 0.685192555939835 | bayes_pls_golite062009 |
| binding | 0.60397276396442 | bayes_pls_golite062009 |
| protein binding | 0.124485878765261 | bayes_pls_golite062009 |
|
Region A: Residues: [446-728] |
1 11 21 31 41 51
| | | | | |
1 WTKNELRGKG SCYKKSLFNI ASSRCMELTP SLACSSKCVF CWRHGTNPVS KNWRWEVDEP 60
61 EYILENALKG HYSMIKQMRG VPGVIAERFA KAFEVRHCAL SLVGEPILYP HINKFIQLLH 120
121 QKGITSFLVC NAQHPEALRN IVKVTQLYVS IDAPTKTELK KVDRPLYKDF WERMVECLEI 180
181 LKTVQNHQRT VFRLTLVKGF NMGDVSAYAD LVQRGLPGFI EVKGATFSGS SDGNGNPLTM 240
241 QNIPFYEECV KFVKAFTTEL QRRGLHYDLA AEHAHSNCLL IAD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [729-810] |
1 11 21 31 41 51
| | | | | |
1 TKFKINGEWH THIDFDKFFV LLNSGKDFTY MDYLEKTPEW ALFGNGGFAP GNTRVYRKDK 60
61 KKQNKENQET TTRETPLPPI PA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
