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View Structure Prediction Details

Protein: YPL066W
Organism: Saccharomyces cerevisiae
Length: 479 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL066W.

Description E-value Query
Range
Subject
Range
YPL066W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
YP066_YEAST - Uncharacterized protein YPL066W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL066W ...
0.0 [1..479] [1..479]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHPVISLKP SYNSVIRGCP GLPDTLPRIE CQLRVRSNNS LPFKLVKIEI VLKTIEIYFN  60
   61 KNLYSSNNSS FTPFNRPSDP SNGHSDTSNQ NISIHYKKNI VLSHPTHDGD DLNNDLIGID 120
  121 IPLTIGLPDD IKETNYNPKF GKTQTFLDCT VFYTEVGGGS SNKKRNFLYP VNVERYTYLP 180
  181 SPSYFRPINR SNITSPDQKF LISYSIENPC VSMNNDTLKL SISIRLNPFP NNATTPSSND 240
  241 FDVSTPTLFS TKKKFKSKLK LKSITTQILE YLEILKNQSE FSSTQTTNIL QTSVRQVDQI 300
  301 ISMNSMIFQF NLKIFTKDKI LQSFRSSESS CPETKVLINK IDDIPLQYHS SITTIGQHFN 360
  361 VSHYLSIRFK FNKSLKNFEI NHPLIISFWS VSQLPLIENL ILQERQTAKF AKKFYKNFGR 420
  421 IKNTSNNNNS SNCLEYPSLP PIIYNFNDPE TNNRFNILYS QKDPSRTDPS KLRRVPVIQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
binding 0.572240309277483 bayes_pls_golite062009
protein binding 0.192799290516878 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle