| Protein: | HNT3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 217 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HNT3.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-77 | [1..217] | [1..217] |
|
|
2.0E-58 | [3..206] | [181..350] |
|
|
3.0E-58 | [2..211] | [33..223] |
|
|
3.0E-57 | [2..206] | [715..889] |
|
|
6.0E-52 | [11..206] | [1..162] |
|
|
2.0E-34 | [1..179] | [1..139] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MSWRYALKNY VTSPETVNDD TVTYFDDKVS IIRDSFPKSE CHLLILPRTM QLSRSHPTKV 60
61 IDAKFKNEFE SYVNSAIDHI FRHFQEKFRI KKSDDDKDPC WDDILKDKNK FVRNFVQVGI 120
121 HSVPSMANLH IHVISKDFHS VRLKNKKHYN SFNTGFFISW D
|
| Detection Method: |  |
| Confidence: | 9.62 |
| Match: | 1av5A |
| Description: | Protein kinase C inhibitor-1, PKCI-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.15228990656368 | bayes_pls_golite062009 |
| nucleic acid binding | 0.73265651460534 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.631037396994785 | bayes_pls_golite062009 |
| transferase activity | 0.405724480958777 | bayes_pls_golite062009 |
| catalytic activity | 0.128210794769743 | bayes_pls_golite062009 |
| protein binding | 0.0801073049129787 | bayes_pls_golite062009 |
|
Region A: Residues: [162-217] |
1 11 21 31 41 51
| | | | | |
1 DLPLNGKNLG TDKEIETTYL KEHDLLCCYC QRNFSNKFSL LKKHLELEFN SHFELK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.439 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.420 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.570 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.348 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.336 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.303 | a.5.2 | UBA-like |
| View | Download | 0.285 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.247 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.242 | d.42.1 | POZ domain |
| View | Download | 0.234 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.222 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.221 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.206 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
