YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: STE4
Organism: Saccharomyces cerevisiae
Length: 423 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STE4.

Description E-value Query
Range
Subject
Range
HETE1_PODAS - Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=3 SV=1
0.0 [3..419] [832..1247]
YY46_NOSS1 - Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=...
gi|25530855 - pir||AC2239 WD-40 repeat protein [imported] - Nostoc sp. (strain PCC 7120)
0.0 [7..422] [1069..1483]

Back

Predicted Domain #1
Region A:
Residues: [1-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAHQMDSIT YSNNVTQQYI QPQSLQDISA VEDEIQNKIE AARQESKQLH AQINKAKHKI  60
   61 QDASLFQMAN KVTSLTKNKI NLKPNIVLKG HNNKISDFRW SRDSKRILSA SQDGFMLIWD 120
  121 SASGLKQNAI PLDSQWVLSC AISPSSTLVA SAGLNNNCTI YRVSKENRVA QNVASIFKGH 180
  181 TCYISDIEFT DNAHILTASG DMTCALWDIP KAKRVREYSD HLGDVLALAI PEEPNSENSS 240
  241 NTFASCGSDG YTYIWDSRSP SAVQSFYVND SDINALRFFK DGMSIVAGSD NGAINMYDLR 300
  301 SDCSIATFSL FRGYEERTPT PTYMAANMEY NTAQSPQTLK STSSSYLDNQ GVVSLDFSAS 360
  361 GRLMYSCYTD IGCVVWDVLK GEIVGKLEGH GGRVTGVRSS PDGLAVCTGS WDSTMKIWSP 420
  421 GYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10094.522879
Match: 1scgB_
Description: No description for 1scgB_ was found.

Predicted functions:

Term Confidence Notes
6.67009948605948 bayes_pls_golite062009
GTPase activity 4.02994814377904 bayes_pls_golite062009
RNA binding 3.77273677738815 bayes_pls_golite062009
binding 2.42570478946173 bayes_pls_golite062009
transcription regulator activity 2.3610959773142 bayes_pls_golite062009
nucleic acid binding 2.30918780727915 bayes_pls_golite062009
transcription repressor activity 2.29049708962212 bayes_pls_golite062009
snoRNA binding 2.27164613239345 bayes_pls_golite062009
dynactin binding 2.07556426531897 bayes_pls_golite062009
DNA binding 1.71685536470455 bayes_pls_golite062009
transcription corepressor activity 1.41752877005447 bayes_pls_golite062009
structural molecule activity 1.31060431370834 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 1.29381240188821 bayes_pls_golite062009
cytoskeletal protein binding 1.26395898062853 bayes_pls_golite062009
protein binding 1.21879977456466 bayes_pls_golite062009
transporter activity 1.17433526848815 bayes_pls_golite062009
histone methyltransferase activity (H3-K4 specific) 1.14494479608652 bayes_pls_golite062009
receptor activity 1.12819778129653 bayes_pls_golite062009
G-protein-coupled receptor binding 1.11754260203517 bayes_pls_golite062009
actin binding 1.08902852052152 bayes_pls_golite062009
transcription factor activity 1.08768505897883 bayes_pls_golite062009
mRNA binding 1.05053985350578 bayes_pls_golite062009
actin filament binding 0.976656531652978 bayes_pls_golite062009
signal transducer activity 0.974380908248463 bayes_pls_golite062009
molecular transducer activity 0.974380908248463 bayes_pls_golite062009
type 1 angiotensin receptor binding 0.920323565472959 bayes_pls_golite062009
angiotensin receptor binding 0.920323565472959 bayes_pls_golite062009
substrate-specific transporter activity 0.703671430935754 bayes_pls_golite062009
dynein binding 0.67053085134802 bayes_pls_golite062009
transcription factor binding 0.489473003915035 bayes_pls_golite062009
tubulin binding 0.418259033722167 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 0.402163203152245 bayes_pls_golite062009
microtubule binding 0.360612852884949 bayes_pls_golite062009
receptor binding 0.316169754698691 bayes_pls_golite062009
transcription cofactor activity 0.30761651528651 bayes_pls_golite062009
enzyme regulator activity 0.161639372576406 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle