| Protein: | SLP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 587 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..587] | [1..587] |
|
|
0.0 | [88..510] | [136..536] |
|
|
0.0 | [45..561] | [60..576] |
|
|
3.0E-64 | [143..383] | [65..325] |
|
|
1.0E-62 | [159..433] | [426..694] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MANRLLIYGL ILWVSIIGSF ALDRNKTAQN AKIGLHDTTV ITTGSTTNVQ KEHSSPLSTG 60
61 SLRTHDFRQA SKVDIRQADI RENGERKEQD ALTQPATPRN PGDSSNSFLS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.202 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.202 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
|
Region A: Residues: [111-517] |
1 11 21 31 41 51
| | | | | |
1 FDEWKKVKSK EHSSGPERHL SRVREPVDPS CYKEKECIGE ELEIDLGFLT NKNEWSEREE 60
61 NQKGFNEEKD IEKVYKKKFN YASLDCAATI VKSNPEAIGA TSTLIESKDK YLLNPCSAPQ 120
121 QFIVIELCED ILVEEIEIAN YEFFSSTFKR FRVSVSDRIP MVKNEWTILG EFEARNSREL 180
181 QKFQIHNPQI WASYLKIEIL SHYEDEFYCP ISLIKVYGKS MMDEFKIDQL KAQEDKEQSI 240
241 GTNNINNLNE QNIQDRCNNI ETRLETPNTS NLSDLAGALS CTSKLIPLKF DEFFKVLNAS 300
301 FCPSKQMISS SSSSAVPVIP EESIFKNIMK RLSQLETNSS LTVSYIEEQS KLLSKSFEQL 360
361 EMAHEAKFSH LVTIFNETMM SNLDLLNNFA NQLKDQSLRI LEEQKLE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.792494243299515 | bayes_pls_golite062009 |
| protein binding | 0.333723290509725 | bayes_pls_golite062009 |
|
Region A: Residues: [518-587] |
1 11 21 31 41 51
| | | | | |
1 NDKFTNRHLL HLERLEKEVS FQRRIVYASF FAFVGLISYL LITRELYFED FEESKNGAIE 60
61 KADIVQQAIR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.454 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.397 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.351 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.328 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.323 | d.42.1 | POZ domain |
| View | Download | 0.302 | a.101.1 | Uteroglobin-like |
| View | Download | 0.298 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.292 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.281 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.280 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.278 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.276 | a.39.1 | EF-hand |
| View | Download | 0.265 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.262 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.258 | a.17.1 | p8-MTCP1 |
| View | Download | 0.233 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.231 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.225 | a.74.1 | Cyclin-like |
| View | Download | 0.225 | g.23.1 | TB module/8-cys domain |
| View | Download | 0.222 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.222 | a.159.2 | FF domain |
| View | Download | 0.217 | a.74.1 | Cyclin-like |
| View | Download | 0.209 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.208 | a.4.5 | "Winged helix" DNA-binding domain |
| Term | Confidence | Notes |
| binding | 1.28519067781062 | bayes_pls_golite062009 |
| protein binding | 1.24709652624798 | bayes_pls_golite062009 |
| catalytic activity | 0.00204734407654122 | bayes_pls_golite062009 |
