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View Structure Prediction Details

Protein: COS10
Organism: Saccharomyces cerevisiae
Length: 374 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COS10.

Description E-value Query
Range
Subject
Range
COS1 - Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-enc...
COS1_YEAST - Protein COS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COS1 PE=1 SV=1
511.0 [0..3] [373..10]

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Predicted Domain #1
Region A:
Residues: [1-59]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEIRLLSS KGLETHSSFC LPEDIFRNRL TWLCSEIRNS GFWIWSLSWL PLAVWWGMA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [60-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STWFYPLLTS VVLILALIAI LPVVQIQYSK YTLSNQLTQL SKEIIKSAPG AYSADWDAVA  60
   61 IHFNSYLYEN KAWKTAHFFF NGTDCQEAFR KTILEPAVLR RQNEDPRFSS IEIL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.920819
Match: PF00674.9
Description: No description for PF00674.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [174-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPYTEDAVQV YFTKVNAQWR LIHGKKECKL TMLENVKLPK ETYRCKLAWS CQRIRISFSP  60
   61 LDFLPDMSDF FICANLSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [252-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ACLVSYWLID IFFRMIDDFQ NIRPKSMKVD DKMQYLSDII NEQGASPEKW DTIARKTNTR  60
   61 LFEKRVWKNE EFFFDGTDCQ AFFERNFSSL LFSKKSASPR SLNVELWKYI QEAQLSCNYE 120
  121 PLP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.537602
Match: PF00674.9
Description: No description for PF00674.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle