| Protein: | LRO1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 661 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRO1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..661] | [1..661] |
|
|
0.0 | [69..657] | [46..616] |
|
|
0.0 | [156..657] | [92..667] |
|
|
0.0 | [159..644] | [21..418] |
|
|
0.0 | [159..644] | [33..430] |
|
|
0.0 | [159..643] | [33..429] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MGTLFRRNVQ NQKSDSDENN KGGSVHNKRE SRNHIHHQQG LGHKRRRGIS GSAKRNERGK 60
61 DFDRKRDGNG RKRWRDSRRL IFILGAFLGV LLPFSFGAYH VHNSDSDLFD NFVNFDSLKV 120
121 YLDDW
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [126-221] |
1 11 21 31 41 51
| | | | | |
1 KDVLPQGISS FIDDIQAGNY STSSLDDLSE NFAVGKQLLR DYNIEAKHPV VMVPGVISTG 60
61 IESWGVIGDD ECDSSAHFRK RLWGSFYMLR TMVMDK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [222-392] |
1 11 21 31 41 51
| | | | | |
1 VCWLKHVMLD PETGLDPPNF TLRAAQGFES TDYFIAGYWI WNKVFQNLGV IGYEPNKMTS 60
61 AAYDWRLAYL DLERRDRYFT KLKEQIELFH QLSGEKVCLI GHSMGSQIIF YFMKWVEAEG 120
121 PLYGNGGRGW VNEHIDSFIN AAGTLLGAPK AVPALISGEM KDTIQLNTLA M
|
| Detection Method: | |
| Confidence: | 9.89 |
| Match: | 1ex9A |
| Description: | Lipase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [393-602] |
1 11 21 31 41 51
| | | | | |
1 YGLEKFFSRI ERVKMLQTWG GIPSMLPKGE EVIWGDMKSS SEDALNNNTD TYGNFIRFER 60
61 NTSDAFNKNL TMKDAINMTL SISPEWLQRR VHEQYSFGYS KNEEELRKNE LHHKHWSNPM 120
121 EVPLPEAPHM KIYCIYGVNN PTERAYVYKE EDDSSALNLT IDYESKQPVF LTEGDGTVPL 180
181 VAHSMCHKWA QGASPYNPAG INVTIVEMKH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [603-661] |
1 11 21 31 41 51
| | | | | |
1 QPDRFDIRGG AKSAEHVDIL GSAELNDYIL KIASGNGDLV EPRQLSNLSQ WVSQMPFPM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
