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View Structure Prediction Details

Protein: YNL203C
Organism: Saccharomyces cerevisiae
Length: 203 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL203C.

Description E-value Query
Range
Subject
Range
gi|50307813, gi|... - gi|50307813|ref|XP_453900.1| unnamed protein product [Kluyveromyces lactis], gi|49643034|emb|CAH0099...
73.0 [0..85] [157..8]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPFDFFNSF KHALAVLKLP SKSMSTTDLK AFGERFAKSH TKFPAAPAMT KSILPNFSTV  60
   61 FLTAFSTCSK LRTSTFAIAK TASLSFANCE IPFAACSVLS WSLPTIAALQ PRRTKASVCT 120
  121 RHIVPAPPVT NATLPLNKSG LQEPSVTNLP SKVFAVFIVS MTRTYDLPNS KSVNIRNYEL 180
  181 LFKFRFSLIW SLTLIPILFG KLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CEIPFAACSV LSWSLPTIAA LQPRRTKASV CTRHIVPAPP VTNATLPLNK SGLQEPSVTN  60
   61 LPSKVFAVFI VSMTRTYDLP NSKSVNIRNY ELLFKFRFSL IWSLTLIPIL FGKLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle