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View Structure Prediction Details

Protein: YNL203C
Organism: Saccharomyces cerevisiae
Length: 203 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL203C.

Description E-value Query
Range
Subject
Range
gi|50307813, gi|... - gi|50307813|ref|XP_453900.1| unnamed protein product [Kluyveromyces lactis], gi|49643034|emb|CAH0099...
73.0 [0..85] [157..8]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPFDFFNSF KHALAVLKLP SKSMSTTDLK AFGERFAKSH TKFPAAPAMT KSILPNFSTV  60
   61 FLTAFSTCSK LRTSTFAIAK TASLSFANCE IPFAACSVLS WSLPTIAALQ PRRTKASVCT 120
  121 RHIVPAPPVT NATLPLNKSG LQEPSVTNLP SKVFAVFIVS MTRTYDLPNS KSVNIRNYEL 180
  181 LFKFRFSLIW SLTLIPILFG KLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CEIPFAACSV LSWSLPTIAA LQPRRTKASV CTRHIVPAPP VTNATLPLNK SGLQEPSVTN  60
   61 LPSKVFAVFI VSMTRTYDLP NSKSVNIRNY ELLFKFRFSL IWSLTLIPIL FGKLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle