YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YNL095C
Organism: Saccharomyces cerevisiae
Length: 642 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL095C.

Description E-value Query
Range
Subject
Range
YNL095C - Putative protein of unknown function predicted to contain a transmembrane domain; YNL095C is not an ...
YNJ5_YEAST - Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL0...
0.0 [1..642] [1..642]
gi|25406451, gi|... - gi|30699180|ref|NP_849892.1| auxin efflux carrier family protein [Arabidopsis thaliana], pir||B96793...
2.0E-69 [4..320] [2..300]
gi|14331098 - gi|14331098|emb|CAC41018.1| putative membrane protein [Zygosaccharomyces bailii]
4.0E-60 [4..266] [3..270]

Back

Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHITLGQAI WVSVKPIIKI YLIIGVGFLM AKMGILTVEA TRIISDIVLT VLLPSLSFNK  60
   61 IVANIEDKDI KSVGIICLSA LLIFGSGFFF AYVVRLFLPV PKQWYGGILA GGMFPNISDL 120
  121 PIAYLQSMDQ GLVFSEEEGN KGVANVIIFL TMFLICIFNL GGFRLIESDF EYNDDESAVR 180
  181 V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SETTKTQPAV SANTTNTDTS ERFFSNEQQL FNNKYTARDS LTEAIGTKGE NADVPPISRR  60
   61 STNSIAPLSL PDTSSNSKIT KPVQVKARNT IACTQSEESQ ATRGSNPLDS QSSASTIHSY 120
  121 NTSESYESSI DTMRARRTAS QPRAYNTTTL LEENCLDEKC PKNMSMAALE PIRSIDMRAL 180
  181 PSQNIHHLIR EYSNVDQYGH QRRNSSLRGA DMNDVHSISS NSTLQTIKTA NLTRILTSDA 240
  241 TVSKKDIETS GESLPQWMRK FSLTPLLVFF LKNCLRPCSM AVIIALTVAF IPWVKALFVT 300
  301 TANTPHISQA PDNAPPLSFF MDFTGYVGAA CVPFGLILLG ATLGRLKIGN LYPGFWKAAV 360
  361 TLVILRQCVM PIFGVLWCDR LVKAGWVNWQ DDRMLLFVIA ISWNLPTMTT LIYFTASFTP 420
  421 PETTAPIQME CVSFFLMLQY PLMVVSLPFL VSYFLKVQMN L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [443-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLTPLLVFFL KNCLRPCSMA VIIALTVAFI PWVKALFVTT ANTPHISQAP DNAPPLSFFM  60
   61 DFTGYVGAAC VPFGLILLGA TLGRLKIGNL YPGFWKAAVT LVILRQCVMP IFGVLWCDRL 120
  121 VKAGWVNWQD DRMLLFVIAI SWNLPTMTTL IYFTASFTPP ETTAPIQMEC VSFFLMLQYP 180
  181 LMVVSLPFLV SYFLKVQMNL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle