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View Structure Prediction Details

Protein: YNL095C
Organism: Saccharomyces cerevisiae
Length: 642 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL095C.

Description E-value Query
Range
Subject
Range
YNL095C - Putative protein of unknown function predicted to contain a transmembrane domain; YNL095C is not an ...
YNJ5_YEAST - Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL0...
0.0 [1..642] [1..642]
gi|25406451, gi|... - gi|30699180|ref|NP_849892.1| auxin efflux carrier family protein [Arabidopsis thaliana], pir||B96793...
2.0E-69 [4..320] [2..300]
gi|14331098 - gi|14331098|emb|CAC41018.1| putative membrane protein [Zygosaccharomyces bailii]
4.0E-60 [4..266] [3..270]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHITLGQAI WVSVKPIIKI YLIIGVGFLM AKMGILTVEA TRIISDIVLT VLLPSLSFNK  60
   61 IVANIEDKDI KSVGIICLSA LLIFGSGFFF AYVVRLFLPV PKQWYGGILA GGMFPNISDL 120
  121 PIAYLQSMDQ GLVFSEEEGN KGVANVIIFL TMFLICIFNL GGFRLIESDF EYNDDESAVR 180
  181 V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.597 0.005 integral to membrane a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.391 0.002 integral to membrane a.25.1 Ferritin-like
View Download 0.437 0.000 integral to membrane a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.597 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.534 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.533 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.437 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.391 N/A N/A a.25.1 Ferritin-like
View Download 0.369 N/A N/A a.39.1 EF-hand
View Download 0.350 N/A N/A a.25.1 Ferritin-like
View Download 0.324 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.321 N/A N/A c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.320 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.300 N/A N/A a.47.2 t-snare proteins
View Download 0.290 N/A N/A a.24.3 Cytochromes
View Download 0.285 N/A N/A i.11.1 Computational models partly based on NMR data
View Download 0.229 N/A N/A a.102.4 Terpenoid cylases/Protein prenyltransferases
View Download 0.218 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain

Predicted Domain #2
Region A:
Residues: [182-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SETTKTQPAV SANTTNTDTS ERFFSNEQQL FNNKYTARDS LTEAIGTKGE NADVPPISRR  60
   61 STNSIAPLSL PDTSSNSKIT KPVQVKARNT IACTQSEESQ ATRGSNPLDS QSSASTIHSY 120
  121 NTSESYESSI DTMRARRTAS QPRAYNTTTL LEENCLDEKC PKNMSMAALE PIRSIDMRAL 180
  181 PSQNIHHLIR EYSNVDQYGH QRRNSSLRGA DMNDVHSISS NSTLQTIKTA NLTRILTSDA 240
  241 TVSKKDIETS GESLPQWMRK FSLTPLLVFF LKNCLRPCSM AVIIALTVAF IPWVKALFVT 300
  301 TANTPHISQA PDNAPPLSFF MDFTGYVGAA CVPFGLILLG ATLGRLKIGN LYPGFWKAAV 360
  361 TLVILRQCVM PIFGVLWCDR LVKAGWVNWQ DDRMLLFVIA ISWNLPTMTT LIYFTASFTP 420
  421 PETTAPIQME CVSFFLMLQY PLMVVSLPFL VSYFLKVQMN L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [443-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLTPLLVFFL KNCLRPCSMA VIIALTVAFI PWVKALFVTT ANTPHISQAP DNAPPLSFFM  60
   61 DFTGYVGAAC VPFGLILLGA TLGRLKIGNL YPGFWKAAVT LVILRQCVMP IFGVLWCDRL 120
  121 VKAGWVNWQD DRMLLFVIAI SWNLPTMTTL IYFTASFTPP ETTAPIQMEC VSFFLMLQYP 180
  181 LMVVSLPFLV SYFLKVQMNL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle