| Protein: | NGL2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 515 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NGL2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..515] | [1..515] |
|
|
4.0E-93 | [16..514] | [135..663] |
|
|
2.0E-90 | [27..514] | [154..669] |
|
|
2.0E-88 | [28..513] | [34..501] |
|
|
6.0E-79 | [77..515] | [176..560] |
|
Region A: Residues: [1-358] |
1 11 21 31 41 51
| | | | | |
1 MTQDKEVKVV APDVAPDQEV EINKSVKDAK HQTNDDSLLQ HKKKGKKGKK SKPIVTPEHI 60
61 AKVRAEREVM RKAKRDAMLA QGVDPDCPPE LHFIRRPFLS LHEAEPVTGF RFKLMTYNCL 120
121 AQALIRRKLF PDSGDALKWY RRSKVLLNEF KYYNSDVICL QEIDHIQFQS FWKDEFSKLG 180
181 YDGQYYRNAT KNHGVAIMWR RELFHQVDKM LIDYDKESSE SISTRTTTNN VGLVLALKFS 240
241 EKVLSNLGKK SSKKCGILIG TTHLFWHPFG TYERTRQCYI VLKKMKEFMH RVNVLQNEND 300
301 GDLSHWFPFF CGDFNSQPFD TPYLSMTSKP VHYRNRAKTV IGCSTSYKFS KVRDGEEG
|
| Detection Method: |  |
| Confidence: | 23.30103 |
| Match: | 1hd7A_ |
| Description: | DNA repair endonuclease Hap1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [359-515] |
1 11 21 31 41 51
| | | | | |
1 ADDEEGGNIE KYGKDQPESP VPEKFHANEE QSELVDKMAQ LHNSLDMRAI SLYSVGYKNV 60
61 HPENAGLDND RGEPEISNWA NTWRGLLDYL FYVKKWDPQS NCQEVETLGD FEKENKVKCR 120
121 GFLRMPPGNE MTKHGQPHVG EYASDHLSMV CDLELQL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| catalytic activity | 1.63030570728465 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.39690524605979 | bayes_pls_golite062009 |
| DNA binding | 1.34290873898836 | bayes_pls_golite062009 |
| transcription regulator activity | 1.27719902384019 | bayes_pls_golite062009 |
| nucleic acid binding | 1.26094583634346 | bayes_pls_golite062009 |
| binding | 1.17923253861699 | bayes_pls_golite062009 |
| hydrolase activity | 1.0186117087165 | bayes_pls_golite062009 |
| nuclease activity | 0.971472202981676 | bayes_pls_golite062009 |
| exonuclease activity | 0.60038717760287 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.488526496507674 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.474030643465787 | bayes_pls_golite062009 |
| protein binding | 0.245882909879445 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.137139876726156 | bayes_pls_golite062009 |
| phosphatase activity | 0.0361187050412868 | bayes_pls_golite062009 |
| transcription activator activity | 0.0201905540007417 | bayes_pls_golite062009 |
