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View Structure Prediction Details

Protein: ESC1
Organism: Saccharomyces cerevisiae
Length: 1658 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ESC1.

Description E-value Query
Range
Subject
Range
MYH2_PIG - Myosin-2 OS=Sus scrofa GN=MYH2 PE=2 SV=1
gi|55741490 - ref|NP_999301.1| myosin heavy chain 2a [Sus scrofa]
0.0 [94..1172] [848..1930]
MYH2_BOVIN - Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
0.0 [94..1172] [849..1931]
gi|9800488, gi|1... - gi|9800488|gb|AAF99315.1|AF272034_1 fast myosin heavy chain isoform 3 [Gallus gallus], gi|165973976|...
0.0 [94..1182] [849..1941]
MYH1 - myosin, heavy chain 1, skeletal muscle, adult
0.0 [94..1172] [848..1930]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [94..1172] [849..1931]
MYH4_RABIT - Myosin-4 OS=Oryctolagus cuniculus GN=MYH4 PE=1 SV=1
0.0 [94..1172] [847..1929]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKKETFTP RANKLKLTTP RRKLKILSSL LDADEDSKMK DQHGYSRVHN DKYRVAKPTQ  60
   61 HSTLHESISS RR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.551 0.977 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.399 0.977 chromatin silencing at telomere a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.378 0.977 chromatin silencing at telomere a.144.1 PABC (PABP) domain
View Download 0.304 0.977 chromatin silencing at telomere a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.385 0.977 chromatin silencing at telomere a.60.9 lambda integrase-like, N-terminal domain
View Download 0.650 0.977 chromatin silencing at telomere a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.548 0.977 chromatin silencing at telomere a.159.2 FF domain
View Download 0.425 0.977 chromatin silencing at telomere a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.378 0.977 chromatin silencing at telomere d.40.1 CI-2 family of serine protease inhibitors
View Download 0.337 0.977 chromatin silencing at telomere a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.277 0.977 chromatin silencing at telomere a.35.1 lambda repressor-like DNA-binding domains
View Download 0.275 0.977 chromatin silencing at telomere a.4.5 "Winged helix" DNA-binding domain
View Download 0.273 0.977 chromatin silencing at telomere c.78.2 Aspartate/glutamate racemase
View Download 0.269 0.977 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.267 0.977 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.264 0.977 chromatin silencing at telomere a.70.1 N-terminal domain of the delta subunit of the F1F0-ATP synthase
View Download 0.253 0.977 chromatin silencing at telomere d.15.1 Ubiquitin-like
View Download 0.242 0.977 chromatin silencing at telomere a.8.3 Families 57/38 glycoside transferase middle domain
View Download 0.236 0.977 chromatin silencing at telomere a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.230 0.977 chromatin silencing at telomere a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.229 0.977 chromatin silencing at telomere a.159.2 FF domain
View Download 0.225 0.977 chromatin silencing at telomere a.48.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
View Download 0.220 0.977 chromatin silencing at telomere a.60.1 SAM/Pointed domain
View Download 0.213 0.977 chromatin silencing at telomere d.58.4 Dimeric alpha+beta barrel
View Download 0.209 0.977 chromatin silencing at telomere a.60.2 RuvA domain 2-like
View Download 0.208 0.977 chromatin silencing at telomere a.35.1 lambda repressor-like DNA-binding domains
View Download 0.208 0.977 chromatin silencing at telomere a.60.2 RuvA domain 2-like
View Download 0.206 0.977 chromatin silencing at telomere a.48.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
View Download 0.206 0.977 chromatin silencing at telomere a.74.1 Cyclin-like
View Download 0.201 0.977 chromatin silencing at telomere a.4.13 Sigma3 and sigma4 domains of RNA polymerase sigma factors

Predicted Domain #2
Region A:
Residues: [73-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSHIHNKSLH EDSARALSWV DSLINRGKSI LTTLEKEDAL FERSLEEERQ RFQLHDSLMN  60
   61 KYTGNSKSHQ RLIDLRKSQY GTD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 1c1gA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [156-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSFQNNDEIP LDSFISSPLP DAEDESSSNI DSDKDEDLEG KQSLIKDFDL ENDEYELSEE  60
   61 EKNSDGQSSP SIMILSDEEY AEEGALQDVS NDEYAEEEGQ VERKNIGQEQ ANVENATQIS 120
  121 SSDSSEGQNY SEGVEMELED DIDVESDAEK DESQGAEGTE HSVDFSKYMQ PRTDNTKIPV 180
  181 IEKYESDEHK VHQRYSEDGA FDFGSVNISV DDESEDEESQ AESYSANAEN VYHHNEHELD 240
  241 DKELIEDIES SDSESQSAQE SEQGSEDDFE YKMKNEKSTS EETENTSESR DQGFAKDAYT 300
  301 KNKVEQQEND EEPEKDDIIR SSLDKNFHGN NNKSEYSENV LEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.221849
Match: 1i84S_
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [499-571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETDPAIVERE NQINDVEGYD VTGKSVESDL HEHSPDNLYD LAARAMLQFQ QSRNSNCPQK  60
   61 EEQVSESYLG HSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.706 0.962 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.530 0.962 chromatin silencing at telomere a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.445 0.962 chromatin silencing at telomere a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.436 0.962 chromatin silencing at telomere a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.492 0.962 chromatin silencing at telomere a.7.6 Ribosomal protein S20
View Download 0.423 0.962 chromatin silencing at telomere a.77.1 DEATH domain
View Download 0.415 0.962 chromatin silencing at telomere a.112.1 Description not found.
View Download 0.389 0.962 chromatin silencing at telomere a.29.2 Bromodomain
View Download 0.366 0.962 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.363 0.962 chromatin silencing at telomere a.17.1 p8-MTCP1
View Download 0.360 0.962 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.341 0.962 chromatin silencing at telomere a.101.1 Uteroglobin-like
View Download 0.334 0.962 chromatin silencing at telomere a.46.1 Methionine synthase domain
View Download 0.325 0.962 chromatin silencing at telomere a.180.1 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
View Download 0.305 0.962 chromatin silencing at telomere d.76.1 GYF domain
View Download 0.295 0.962 chromatin silencing at telomere a.157.1 Skp1 dimerisation domain-like
View Download 0.290 0.962 chromatin silencing at telomere a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.288 0.962 chromatin silencing at telomere a.77.1 DEATH domain
View Download 0.287 0.962 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.281 0.962 chromatin silencing at telomere a.64.1 Saposin
View Download 0.274 0.962 chromatin silencing at telomere a.7.6 Ribosomal protein S20
View Download 0.273 0.962 chromatin silencing at telomere a.144.2 Ribosomal protein L20
View Download 0.271 0.962 chromatin silencing at telomere a.133.1 Phospholipase A2, PLA2
View Download 0.266 0.962 chromatin silencing at telomere a.5.6 Hypothetical protein MTH1615
View Download 0.264 0.962 chromatin silencing at telomere f.17.1 F1F0 ATP synthase subunit C
View Download 0.262 0.962 chromatin silencing at telomere d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.260 0.962 chromatin silencing at telomere d.146.1 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
View Download 0.258 0.962 chromatin silencing at telomere a.16.1 S15/NS1 RNA-binding domain
View Download 0.249 0.962 chromatin silencing at telomere d.47.1 Ribosomal protein L11, N-terminal domain
View Download 0.245 0.962 chromatin silencing at telomere a.126.1 Serum albumin-like
View Download 0.243 0.962 chromatin silencing at telomere a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.239 0.962 chromatin silencing at telomere a.4.1 Homeodomain-like
View Download 0.237 0.962 chromatin silencing at telomere a.3.1 Cytochrome c
View Download 0.229 0.962 chromatin silencing at telomere a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.228 0.962 chromatin silencing at telomere a.69.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
View Download 0.226 0.962 chromatin silencing at telomere d.95.1 Glucose permease domain IIB
View Download 0.225 0.962 chromatin silencing at telomere a.7.6 Ribosomal protein S20
View Download 0.222 0.962 chromatin silencing at telomere d.47.1 Ribosomal protein L11, N-terminal domain
View Download 0.215 0.962 chromatin silencing at telomere a.3.1 Cytochrome c
View Download 0.207 0.962 chromatin silencing at telomere a.44.1 Disulphide-bond formation facilitator (DSBA), insertion domain
View Download 0.203 0.962 chromatin silencing at telomere a.4.1 Homeodomain-like

Predicted Domain #5
Region A:
Residues: [572-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSNLSGRSLD ESEEQIPLKD FTGENNNNLK TDRGDLSSSV EIEVEKVSEK KLDGSTEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [630-711]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELVPLSTDTT INNSSLGNED SIYYSLDDAD AISENLTDVP LMEIKTTPKY EVVISESVYS  60
   61 STSYEDNTVA MPPQVEYTSP FM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [712-773]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDPFNSLNDD YEKKHDLLKS TLAALAPAFT KKDAEFVEAG VTKSCLTSTS GHTNIFHTSK  60
   61 ET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #8
Region A:
Residues: [774-856]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQVSDLDEST ENVTFENENT GDENKNQSKN FPGVANSTDK STEDNTDEKY FSAINYTNVT  60
   61 GDSSCEDIIE TASNVEENLR YCE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #9
Region A:
Residues: [857-1197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDMNEAEMSS GDECVKQNDD GSKTQISFST DSPDNFQESN DNTEFSSTKY KVRNSDLEDD  60
   61 ESLKKELTKA EVVDKLDEEE SEDSYEQDYA DPEPGNDEGS NENIVKGTKK DTLGIVEPEN 120
  121 EKVNKVHEEE TLFEANVSSS VNVQNKDMHT DVINQEAQAN YEAGERKYYI QNTDTEEAHI 180
  181 SIIERIDENA IGNNMEIPER SCVEKTHNEV LFERRATTIE NTKALENNTN MHDQVSQACS 240
  241 DSDRDQDSTA EKNVEGSAKH NLDIRVSSSE IESVEPLKPE SDRSNIFSSP IRVIGAVVKG 300
  301 VGKVVDVAES FVKKIDVMDS ESDDNVDIGD YNQDIFNKSN S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1198-1273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDASVNMKSV SSKERDSDED EAVILGGVTA EAHNDNGNNS RVINIDPTTN GAYEEDSEVF  60
   61 RQQVKDKENL HKSEEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.768 d.58.17 Metal-binding domain
View Download 0.681 d.58.4 Dimeric alpha+beta barrel
View Download 0.721 d.58.17 Metal-binding domain
View Download 0.677 d.50.2 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
View Download 0.660 d.58.3 Protease propeptides/inhibitors
View Download 0.658 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.639 a.112.1 Description not found.
View Download 0.627 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.614 b.114.1 N-utilization substance G protein NusG, insert domain
View Download 0.614 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.589 d.93.1 SH2 domain
View Download 0.581 d.58.3 Protease propeptides/inhibitors
View Download 0.568 d.58.4 Dimeric alpha+beta barrel
View Download 0.558 d.58.17 Metal-binding domain
View Download 0.556 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.541 d.58.17 Metal-binding domain
View Download 0.536 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.528 b.55.1 PH domain-like
View Download 0.522 d.58.7 RNA-binding domain, RBD
View Download 0.519 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.519 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.496 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.493 d.10.1 DNA-binding domain
View Download 0.492 c.47.2 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
View Download 0.484 b.36.1 PDZ domain-like
View Download 0.477 b.84.2 Rudiment single hybrid motif
View Download 0.465 d.58.12 eEF-1beta-like
View Download 0.462 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.456 d.58.40 D-ribose-5-phosphate isomerase (RpiA), lid domain
View Download 0.448 d.58.3 Protease propeptides/inhibitors
View Download 0.448 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.445 d.58.12 eEF-1beta-like
View Download 0.431 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.429 d.58.17 Metal-binding domain
View Download 0.412 d.10.1 DNA-binding domain
View Download 0.395 c.55.7 Methylated DNA-protein cysteine methyltransferase domain
View Download 0.394 d.56.1 GroEL-intermediate domain like
View Download 0.392 d.58.24 CheY-binding domain of CheA
View Download 0.391 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.390 d.58.17 Metal-binding domain
View Download 0.387 b.1.14 Invasin/intimin cell-adhesion fragments
View Download 0.377 d.58.12 eEF-1beta-like
View Download 0.376 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.376 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.374 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.371 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.369 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.368 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.368 d.50.2 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
View Download 0.364 b.36.1 PDZ domain-like
View Download 0.363 d.54.1 Enolase N-terminal domain-like
View Download 0.362 c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.351 b.55.1 PH domain-like
View Download 0.349 b.40.6 MOP-like
View Download 0.349 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.348 d.58.12 eEF-1beta-like
View Download 0.342 d.58.8 Viral DNA-binding domain
View Download 0.342 d.58.8 Viral DNA-binding domain
View Download 0.341 d.52.4 YhbC-like, N-terminal domain
View Download 0.341 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.340 d.93.1 SH2 domain
View Download 0.340 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.332 b.1.2 Fibronectin type III
View Download 0.327 d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like
View Download 0.325 d.93.1 SH2 domain
View Download 0.320 c.55.4 Translational machinery components
View Download 0.320 d.9.2 Description not found.
View Download 0.317 d.9.1 Interleukin 8-like chemokines
View Download 0.315 c.55.4 Translational machinery components
View Download 0.314 d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like
View Download 0.313 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.312 d.58.7 RNA-binding domain, RBD
View Download 0.312 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.312 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.312 b.55.1 PH domain-like
View Download 0.311 b.59.1 XRCC4, N-terminal domain
View Download 0.308 d.129.1 TATA-box binding protein-like
View Download 0.307 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.306 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.303 b.40.2 Bacterial enterotoxins
View Download 0.299 d.93.1 SH2 domain
View Download 0.294 c.47.2 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
View Download 0.293 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.287 c.55.4 Translational machinery components
View Download 0.284 d.222.1 YbaB-like
View Download 0.278 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.278 b.55.1 PH domain-like
View Download 0.277 d.214.1 Hypothetical protein MTH1880
View Download 0.277 b.43.4 Riboflavin synthase domain-like
View Download 0.271 d.58.10 Acylphosphatase-like
View Download 0.266 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.263 d.204.1 Ribosome binding protein Y (YfiA homologue)
View Download 0.263 d.10.1 DNA-binding domain
View Download 0.259 b.55.1 PH domain-like
View Download 0.256 b.3.5 B repeat unit of collagen binding surface protein (cna)
View Download 0.256 d.58.43 Mechanosensitive channel protein MscS (YggB), C-terminal domain
View Download 0.252 c.47.1 Thioredoxin-like
View Download 0.248 b.55.1 PH domain-like
View Download 0.246 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.245 d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.243 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.241 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.239 d.58.12 eEF-1beta-like
View Download 0.237 b.1.1 Immunoglobulin
View Download 0.233 d.192.1 YlxR-like
View Download 0.229 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.226 g.41.3 Zinc beta-ribbon
View Download 0.225 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.223 d.58.2 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
View Download 0.222 c.51.3 B12-dependend dehydatases associated subunit
View Download 0.220 d.58.12 eEF-1beta-like
View Download 0.219 b.40.2 Bacterial enterotoxins
View Download 0.218 b.1.14 Invasin/intimin cell-adhesion fragments
View Download 0.212 d.93.1 SH2 domain
View Download 0.210 d.110.4 SNARE-like
View Download 0.208 d.41.3 Pyrimidine nucleoside phosphorylase C-terminal domain
View Download 0.208 d.58.10 Acylphosphatase-like
View Download 0.207 d.93.1 SH2 domain
View Download 0.205 d.93.1 SH2 domain
View Download 0.201 d.58.42 N-utilization substance G protein NusG, N-terminal domain

Predicted Domain #11
Region A:
Residues: [1274-1342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVEGLQSEQH FEKKDHSENE EEFDTIYGDI TSANIHSNAP DDIKRQQLLK NLSDLENYSQ  60
   61 RLIEDSRRG

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.86
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #12
Region A:
Residues: [1343-1658]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNQEESDEVN TSRERDLTFE KSVNEKYAGA IEEDTFSELD ISIQHPEHEE DLDLSNNQER  60
   61 SIEELNSEPE EAELYELEIE GPTETAASSK MNDDERQRGN IPSTDLPSDP PSDKEEVTDS 120
  121 YPYSNSENIT AEKSAPTSPE VYEIFSDTPN EVPMEINDEI PATTLEKHDK TNVTSVLDDR 180
  181 SEHLSSHDVD NEPHDNSINI KVNEGEEPEH QAVDIPVKVE VKEEQEEMPS KSVLEEQKPS 240
  241 MELINDKSSP ENNNDEETNR EKDKTKAKKK SRKRNYNSRR RKRKITEGSS AASNTKRRRG 300
  301 HEPKSRGQNT HPSVDK

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 9.71
Match: 1m2vB
Description: Sec24
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle