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View Structure Prediction Details

Protein: AIM36
Organism: Saccharomyces cerevisiae
Length: 255 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM36.

Description E-value Query
Range
Subject
Range
AIM36 - Protein of unknown function; null mutant displays reduced respiratory growth and elevated frequency ...
AIM36_YEAST - Altered inheritance of mitochondria protein 36, mitochondrial OS=Saccharomyces cerevisiae (strain AT...
0.0 [1..255] [1..255]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPLRKSVL ASCRHCFKVC GGLPQKQLPL FSPLLLRARY SSTDSSTKRS NKSDKIDAPG  60
   61 FKKIFLVAII GTVIFVKTVQ SLDKNKPKTT LSEEEFENVV KGLKRRVAIF PQGEVDIKFS 120
  121 LSPSIEETRK VLQKSQGDDI NELQFVDPVK VIDYYRTLRD DRYEALLNEY YKKYGCDTYA 180
  181 YNLPTGMLVM LLGRYFKENF KTGDKLVVVN FPHSIADATR FENEVSIVSK IFVPRKLSGS 240
  241 DVCKYYETVG KADII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLSEEEFENV VKGLKRRVAI FPQGEVDIKF SLSPSIEETR KVLQKSQGDD INELQFVDPV  60
   61 KVIDYYRTLR DDRYEALLNE YYKKYGCDTY AYNLPTGMLV MLLGRYFKEN FKTGDKLVVV 120
  121 NFPHSIADAT RFENEVSIVS KIFVPRKLSG SDVCKYYETV GKADII

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.26
Match: 1ukyA
Description: SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.773732043277332 bayes_pls_golite062009
catalytic activity 0.176212702885001 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.144577483271964 bayes_pls_golite062009
pyrophosphatase activity 0.139313036912271 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.129169762987777 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.127860910307335 bayes_pls_golite062009
hydrolase activity 0.0424527315683166 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle