| Protein: | CTF18 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 741 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTF18.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..741] | [1..741] |
|
|
0.0 | [49..654] | [82..644] |
|
|
0.0 | [49..654] | [116..677] |
|
|
0.0 | [44..650] | [101..662] |
|
|
0.0 | [59..677] | [114..664] |
|
|
0.0 | [12..659] | [55..649] |
|
|
0.0 | [91..659] | [115..618] |
|
|
0.0 | [112..659] | [165..647] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MVDTAPYIGS LGRSSLFDTG DIEQAPGNNA IGINEEDIHA FVSSTGETVQ LKKKPAKLAT 60
61 GNISLYTNPD TVWRSDDTYG ININYLLDKI EASGDDRTNA QKTSPITGKI GSDTLWVEKW 120
121 RP
|
| Detection Method: |  |
| Confidence: | 104.165202 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-319] |
1 11 21 31 41 51
| | | | | |
1 KKFLDLVGNE KTNRRMLGWL RQWTPAVFKE QLPKLPTEKE VSDMELDPLK RPPKKILLLH 60
61 GPPGIGKTSV AHVIAKQSGF SVSEINASDE RAGPMVKEKI YNLLFNHTFD TNPVCLVADE 120
121 IDGSIESGFI RILVDIMQSD IKATNKLLYG QPDKKDKKRK KKRSKLLTRP IICICNNLYA 180
181 PSLEKLKPFC EIIAVKR
|
| Detection Method: | |
| Confidence: | 104.165202 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [320-441] |
1 11 21 31 41 51
| | | | | |
1 PSDTTLLERL NLICHKENMN IPIKAINDLI DLAQGDVRNC INNLQFLASN VDSRDSSASD 60
61 KPACAKNTWA SSNKDSPISW FKIVNQLFRK DPHRDIKEQF YELLNQVELN GNSDRILQGC 120
121 FN
|
| Detection Method: | |
| Confidence: | 104.165202 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [442-654] |
1 11 21 31 41 51
| | | | | |
1 IFPYVKYSDN GIRKPANISD WLFFHDLMYQ SMYAHNGELL RYSALVPLVF FQTFGDIANK 60
61 DDIRMKNSEY EQRELKRANS DIVSLIMRHI SVQSPLMASF TDRKSLIFEI LPYLDSMISS 120
121 DFNKIRNLKL KQAIMEELVQ LLKSFQLNLI QNRSEGFDVR GGLTIDPPID EVVLLNPKHI 180
181 NEVQHKRANN LSSLLAKIEE NRAKKRHIDQ VTE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [655-741] |
1 11 21 31 41 51
| | | | | |
1 DRLQSQEMHS KKVKTGLNSS SSTIDFFKNQ YGLLKQTQEL EETQKTIGSD ETNQADDCNQ 60
61 TVKIWVKYNE GFSNAVRKNV TWNNLWE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
