| Protein: | HIF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 385 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..385] | [1..385] |
|
Region A: Residues: [1-385] |
1 11 21 31 41 51
| | | | | |
1 MKLRAEDVLA NGTSRHKVQI DMERQVQIAK DLLAQKKFLE AAKRCQQTLD SLPKDGLLPD 60
61 PELFTIFAQA VYNMEVQNSG NLFGDALLAG DDGSGSESES EPESDVSNGE EGNENGQTEI 120
121 PNSRMFQFDQ EEEDLTGDVD SGDSEDSGEG SEEEEENVEK EEERLALHEL ANFSPANEHD 180
181 DEIEDVSQLR KSGFHIYFEN DLYENALDLL AQALMLLGRP TADGQSLTEN SRLRIGDVYI 240
241 LMGDIEREAE MFSRAIHHYL KALGYYKTLK PAEQVTEKVI QAEFLVCDAL RWVDQVPAKD 300
301 KLKRFKHAKA LLEKHMTTRP KDSELQQARL AQIQDDIDEV QENQQHGSKR PLSQPTTSIG 360
361 FPALEKPLGD FNDLSQLVKK KPRRH
|
| Detection Method: |  |
| Confidence: | 7.63 |
| Match: | 1gt8A |
| Description: | Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| N-acetyltransferase activity | 4.5018555446719 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.22651890245436 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.92209893972978 | bayes_pls_golite062009 |
| acyltransferase activity | 3.39383036142893 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.35794141017853 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.18633096034095 | bayes_pls_golite062009 |
| binding | 2.64850159998065 | bayes_pls_golite062009 |
| transcription regulator activity | 2.36976362065221 | bayes_pls_golite062009 |
| nucleic acid binding | 2.05265117445838 | bayes_pls_golite062009 |
| DNA binding | 1.96740629247708 | bayes_pls_golite062009 |
| protein binding | 1.51322932625387 | bayes_pls_golite062009 |
| transcription repressor activity | 1.40841220242471 | bayes_pls_golite062009 |
| transcription factor activity | 1.22524361832616 | bayes_pls_golite062009 |
| transcription factor binding | 0.447234745044969 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.201108481303385 | bayes_pls_golite062009 |
| ligase activity | 0.185046836723848 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.0645101607447045 | bayes_pls_golite062009 |
| transcription activator activity | 0.0514451541233234 | bayes_pls_golite062009 |
