| Protein: | UBA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1024 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [7..1023] | [66..1078] |
|
|
0.0 | [12..1023] | [41..1049] |
|
|
0.0 | [2..1023] | [59..1078] |
|
|
0.0 | [3..1024] | [2..1012] |
|
|
0.0 | [4..1020] | [39..1053] |
|
|
0.0 | [2..1020] | [181..1186] |
|
Region A: Residues: [1-306] |
1 11 21 31 41 51
| | | | | |
1 MSSNNSGLSA AGEIDESLYS RQLYVLGKEA MLKMQTSNVL ILGLKGLGVE IAKNVVLAGV 60
61 KSMTVFDPEP VQLADLSTQF FLTEKDIGQK RGDVTRAKLA ELNAYVPVNV LDSLDDVTQL 120
121 SQFQVVVATD TVSLEDKVKI NEFCHSSGIR FISSETRGLF GNTFVDLGDE FTVLDPTGEE 180
181 PRTGMVSDIE PDGTVTMLDD NRHGLEDGNF VRFSEVEGLD KLNDGTLFKV EVLGPFAFRI 240
241 GSVKEYGEYK KGGIFTEVKV PRKISFKSLK QQLSNPEFVF SDFAKFDRAA QLHLGFQALH 300
301 QFAVRH
|
| Detection Method: |  |
| Confidence: | 176.529817 |
| Match: | 1jw9B_ |
| Description: | Molybdenum cofactor biosynthesis protein MoeB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [307-408] |
1 11 21 31 41 51
| | | | | |
1 NGELPRTMND EDANELIKLV TDLSVQQPEV LGEGVDVNED LIKELSYQAR GDIPGVVAFF 60
61 GGLVAQEVLK ACSGKFTPLK QFMYFDSLES LPDPKNFPRN EK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [409-620] |
1 11 21 31 41 51
| | | | | |
1 TTQPVNSRYD NQIAVFGLDF QKKIANSKVF LVGSGAIGCE MLKNWALLGL GSGSDGYIVV 60
61 TDNDSIEKSN LNRQFLFRPK DVGKNKSEVA AEAVCAMNPD LKGKINAKID KVGPETEEIF 120
121 NDSFWESLDF VTNALDNVDA RTYVDRRCVF YRKPLLESGT LGTKGNTQVI IPRLTESYSS 180
181 SRDPPEKSIP LCTLRSFPNK IDHTIAWAKS LF
|
| Detection Method: | |
| Confidence: | 7.43 |
| Match: | 1eq2A |
| Description: | ADP-L-glycero-D-mannoheptose 6-epimerase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [621-750] |
1 11 21 31 41 51
| | | | | |
1 QGYFTDSAEN VNMYLTQPNF VEQTLKQSGD VKGVLESISD SLSSKPHNFE DCIKWARLEF 60
61 EKKFNHDIKQ LLFNFPKDAK TSNGEPFWSG AKRAPTPLEF DIYNNDHFHF VVAGASLRAY 120
121 NYGIKSDDSN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [751-813] |
1 11 21 31 41 51
| | | | | |
1 SKPNVDEYKS VIDHMIIPEF TPNANLKIQV NDDDPDPNAN AANGSDEIDQ LVSSLPDPST 60
61 LAG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [814-1024] |
1 11 21 31 41 51
| | | | | |
1 FKLEPVDFEK DDDTNHHIEF ITACSNCRAQ NYFIETADRQ KTKFIAGRII PAIATTTSLV 60
61 TGLVNLELYK LIDNKTDIEQ YKNGFVNLAL PFFGFSEPIA SPKGEYNNKK YDKIWDRFDI 120
121 KGDIKLSDLI EHFEKDEGLE ITMLSYGVSL LYASFFPPKK LKERLNLPIT QLVKLVTKKD 180
181 IPAHVSTMIL EICADDKEGE DVEVPFITIH L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
