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Protein Overview: gi|220956874, gi...

General Information:
Name(s) found: gi|220956874 [NCBI NR]
gi|220947422 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|220956874|gb|ACL90980.1| Uba1-PA [synthetic construct] [NCBI NR]
  • gi|220947422|gb|ACL86254.1| Uba1-PA [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 1191 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGQQLMAD SPACSSSDHS PLAKKRRLEL LGDGVGAMGM EEEEAGGATS SSSSNNYENH  60
   61 DKAGGVDISG KCQSKTTSEH QLELCVSSST SDTCGVNAAA KRAEKQKLKQ SQGSGDDVST 120
  121 SSAVEKEGSK RPEKRNYLNT TTIESQEASS SASATSNSNN NVSSSNNNSN NSTNNRQLEG 180
  181 SSNMAGNSAA AGGDIDESLY SRQLYVLGHD AMRRMANSDI LLSGLGGLGL EIAKNVILGG 240
  241 VKSITLHDTA TCGLHDLSSQ FYLTEADIGK NRAEASCAQL AELNNYVRTV SHTGPLTEEF 300
  301 LRKFRVVVLT NSDGEEQQRI AKFAHENGIA LIIAETRGLF AKVFCDFGES FTIYDQDGTQ 360
  361 PISTMIASIT HDAQGVVTCL DETRHGFNDG DYVTFSEVQG MQELNGCQPL KITVLGPYTF 420
  421 SIGDTSKFGE YKSGGVATQV KMPKTISFKP LAQATEEPEF LISDFAKLDS PATLHVAFNA 480
  481 LSCYRKAHNG ALPRPWNEED ANSFLEVVRA SSNAEVDEKL VLQFAKICSG NTCPLDAAVG 540
  541 GIVAQEVLKA CSGKFTPIYQ WLYFDALECL PTEGVEEADA QPVGSRYDSQ IAIFGKKFQE 600
  601 KLADSKWFIV GAGAIGCELL KNFGMLGLGT GNGQIFVTDM DLIEKSNLNR QFLFRPHDVQ 660
  661 KPKSMTAADA IKRMNPEVNV TAYELRVGAE TEKVFSEDFF GKLDGVANAL DNVDARIYMD 720
  721 RKCIFNRIPL VETGTLGTLG NVQVIVPFAT ESYSSSQDPP EKSIPICTLK NFPNAIEHTL 780
  781 QWARDAFEGV FKQSAENAAQ YIADPQFTER IAKLPGIQPL EILDSIKKAL IDDKPKSFAH 840
  841 CVEWARLYWE DQYVNQIKQL LFNFPPDQIT SSGQPFWSGP KRCPDPLVFD VNDPMHLDFI 900
  901 YAAANLRAEV YGIEQVRNRE TIAELVQKVK VPEFKPRSGV KIETNEAAAA ASANNFDDGE 960
  961 LDQDRVDKII SELLKNADKS SKITPLEFEK DDDSNLHMDF IVACSNLRAA NYKIPPADRH1020
 1021 KSKLIAGKII PAIATTTSVL SGLAVLEVIK LIVGHRDLVK FKNGFANLAL PFMAFSEPLP1080
 1081 AAKNTYYGKE WTLWDRFEVT GELSLQEFLN YFEENEKLKI TMLSQGVSML YSFFMPKAKC1140
 1141 SERLPLPMSE VVRRVSKRRL EPHERSLVFE ICCNDVDGED VEVPYVRYTL P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] deduced N/A No confident structure predictions are available.
    2 View Details [192..576] PSI-BLAST 44.69897 SUMO E1 ACTIVATING ENZYME SAE1-SAE2-MG-ATP COMPLEX
    3 View Details [577..982] PSI-BLAST 60.221849 No description for 2nvuB was found.
    4 View Details [983..1075] PSI-BLAST 70.0 Crystal structure of fragment of mouse ubiquitin-activating enzyme
    5 View Details [1076..1191] PSI-BLAST 5.522879 Structural basis for recruitment of Ubc12 by an E2-binding domain in NEDD8's E1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle