Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL187C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..750] | [1..750] |
|
|
8.0E-4 | [442..641] | [98..283] |
|
|
9.0E-4 | [196..360] | [1525..1696] |
|
|
0.003 | [88..357] | [1006..1246] |
|
|
0.005 | [97..358] | [1240..1504] |
|
|
0.008 | [57..386] | [1168..1511] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MRIEKHRTPL SKGIIWTILS VCLLFMFTTL ILVIVATAGS TANYKPLTNI YIGEADIKHI 60
61 NVSKVIPQIG PILTILGSAL TAPNSSLDDI FGAMKNIADT PALTPLLTLL SNADNTTVTI 120
121 ESLTELAPLA ISGNPASSTR QLTEINGLLK YSDNATETLD GLSRLVSASL SSASSNSS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [179-367] |
1 11 21 31 41 51
| | | | | |
1 SDSTTLVLDL LKDSDNPQNS TDALLTLNNL TMSEKAQLLP VFRLFAFSTN QTATMTALAT 60
61 LMNTTISSSL AQTLLTQLQN TISNGGSLNN TFSTLQPLVP QASAPAFDAV ELLLNQTTST 120
121 NQTLSTLSDL LEQNLTQSSS AKKAFAALTQ LMENSDNSTM VVTSVQSLAA VTNTTQSTQQ 180
181 LIGLDDVIS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.0786210554855438 | bayes_pls_golite062009 |
|
Region A: Residues: [368-441] |
1 11 21 31 41 51
| | | | | |
1 SSSNTNETLS ILSELQSGLS GNSSSVQYIP YLFSLLGAST DPKTTFSSLV TLTSWAQENP 60
61 QTFLPILDIL ADAK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.846 | 0.003 | mitochondrion | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.783 | 0.003 | mitochondrion | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.782 | 0.003 | mitochondrion | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.646 | 0.003 | mitochondrion | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.646 | 0.003 | mitochondrion | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.627 | 0.003 | mitochondrion | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.623 | 0.003 | mitochondrion | a.17.1 | p8-MTCP1 |
| View | Download | 0.601 | 0.003 | mitochondrion | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.591 | 0.003 | mitochondrion | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.591 | 0.003 | mitochondrion | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.578 | 0.003 | mitochondrion | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.508 | 0.003 | mitochondrion | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.506 | 0.003 | mitochondrion | a.65.1 | Annexin |
| View | Download | 0.502 | 0.003 | mitochondrion | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.496 | 0.003 | mitochondrion | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.492 | 0.003 | mitochondrion | a.144.1 | PABC (PABP) domain |
| View | Download | 0.480 | 0.003 | mitochondrion | a.74.1 | Cyclin-like |
| View | Download | 0.456 | 0.003 | mitochondrion | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.454 | 0.003 | mitochondrion | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.448 | 0.003 | mitochondrion | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.440 | 0.003 | mitochondrion | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.435 | 0.003 | mitochondrion | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.424 | 0.003 | mitochondrion | a.74.1 | Cyclin-like |
| View | Download | 0.421 | 0.003 | mitochondrion | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.404 | 0.003 | mitochondrion | a.4.1 | Homeodomain-like |
| View | Download | 0.398 | 0.003 | mitochondrion | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.397 | 0.003 | mitochondrion | a.118.9 | ENTH/VHS domain |
| View | Download | 0.395 | 0.003 | mitochondrion | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.393 | 0.003 | mitochondrion | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.392 | 0.003 | mitochondrion | a.4.12 | TrpR-like |
| View | Download | 0.384 | 0.003 | mitochondrion | a.4.1 | Homeodomain-like |
| View | Download | 0.376 | 0.003 | mitochondrion | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.374 | 0.003 | mitochondrion | a.4.1 | Homeodomain-like |
| View | Download | 0.369 | 0.003 | mitochondrion | a.39.1 | EF-hand |
| View | Download | 0.365 | 0.003 | mitochondrion | a.4.1 | Homeodomain-like |
| View | Download | 0.364 | 0.003 | mitochondrion | a.39.1 | EF-hand |
| View | Download | 0.358 | 0.003 | mitochondrion | a.60.8 | HRDC-like |
| View | Download | 0.358 | 0.003 | mitochondrion | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.349 | 0.003 | mitochondrion | a.5.2 | UBA-like |
| View | Download | 0.347 | 0.003 | mitochondrion | a.112.1 | Description not found. |
| View | Download | 0.345 | 0.003 | mitochondrion | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.336 | 0.003 | mitochondrion | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.330 | 0.003 | mitochondrion | a.159.2 | FF domain |
| View | Download | 0.326 | 0.003 | mitochondrion | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.326 | 0.003 | mitochondrion | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.320 | 0.003 | mitochondrion | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.318 | 0.003 | mitochondrion | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.311 | 0.003 | mitochondrion | a.39.1 | EF-hand |
| View | Download | 0.310 | 0.003 | mitochondrion | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.305 | 0.003 | mitochondrion | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.303 | 0.003 | mitochondrion | a.74.1 | Cyclin-like |
| View | Download | 0.303 | 0.003 | mitochondrion | a.7.7 | BAG domain |
| View | Download | 0.303 | 0.003 | mitochondrion | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.301 | 0.003 | mitochondrion | a.60.1 | SAM/Pointed domain |
| View | Download | 0.299 | 0.003 | mitochondrion | a.24.3 | Cytochromes |
| View | Download | 0.295 | 0.003 | mitochondrion | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.290 | 0.003 | mitochondrion | a.39.1 | EF-hand |
| View | Download | 0.288 | 0.003 | mitochondrion | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.285 | 0.003 | mitochondrion | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.284 | 0.003 | mitochondrion | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.284 | 0.003 | mitochondrion | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.284 | 0.003 | mitochondrion | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.281 | 0.003 | mitochondrion | a.77.1 | DEATH domain |
| View | Download | 0.279 | 0.003 | mitochondrion | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.278 | 0.003 | mitochondrion | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.278 | 0.003 | mitochondrion | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.275 | 0.003 | mitochondrion | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.271 | 0.003 | mitochondrion | a.118.9 | ENTH/VHS domain |
| View | Download | 0.270 | 0.003 | mitochondrion | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.268 | 0.003 | mitochondrion | a.60.1 | SAM/Pointed domain |
| View | Download | 0.267 | 0.003 | mitochondrion | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.266 | 0.003 | mitochondrion | a.118.8 | TPR-like |
| View | Download | 0.263 | 0.003 | mitochondrion | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.262 | 0.003 | mitochondrion | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.258 | 0.003 | mitochondrion | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.257 | 0.003 | mitochondrion | e.40.1 | Cullin homology domain |
| View | Download | 0.255 | 0.003 | mitochondrion | a.21.1 | HMG-box |
| View | Download | 0.240 | 0.003 | mitochondrion | a.2.7 | tRNA-binding arm |
| View | Download | 0.240 | 0.003 | mitochondrion | a.101.1 | Uteroglobin-like |
| View | Download | 0.237 | 0.003 | mitochondrion | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.235 | 0.003 | mitochondrion | a.28.1 | ACP-like |
| View | Download | 0.233 | 0.003 | mitochondrion | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.231 | 0.003 | mitochondrion | d.42.1 | POZ domain |
| View | Download | 0.229 | 0.003 | mitochondrion | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.229 | 0.003 | mitochondrion | a.59.1 | PAH2 domain |
| View | Download | 0.218 | 0.003 | mitochondrion | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.218 | 0.003 | mitochondrion | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.214 | 0.003 | mitochondrion | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | 0.003 | mitochondrion | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.212 | 0.003 | mitochondrion | a.2.3 | Chaperone J-domain |
| View | Download | 0.212 | 0.003 | mitochondrion | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.211 | 0.003 | mitochondrion | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.210 | 0.003 | mitochondrion | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.208 | 0.003 | mitochondrion | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.208 | 0.003 | mitochondrion | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.206 | 0.003 | mitochondrion | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.201 | 0.003 | mitochondrion | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.201 | 0.003 | mitochondrion | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [442-689] |
1 11 21 31 41 51
| | | | | |
1 SVQPISAEEL NAMTPNILEY LKIPIYYRLS IFTLCHANLE NKILDCNSPH AVQNLDFRSI 60
61 IYDALVTSDF QPYLNALNIS ANDLYLEGKL LHREHQYVPA VRSVLALNLL AIIFSFFTMI 120
121 FIILLYFNRY MFKQPLWLIA LALHVCVGVA TVLAAIIISV MIAIIKSGTA DDKYGVVFKA 180
181 GPAYTGLIWT AFALSFIATG LIIYTWWRNR RSGRYMSGSV TNRKGEIYTY GDGSAISADR 240
241 FGDHNLGD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [690-750] |
1 11 21 31 41 51
| | | | | |
1 DDDADFEKQV NRNEITAIDN SSSANNTDVT GSTSNRTELS HPDVTPKDSN GPVNNNAHLV 60
61 A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.298 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.278 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.386 | d.10.1 | DNA-binding domain |
| View | Download | 0.486 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.335 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.225 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.210 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
