YRC Public Data Repository - Protein Structure Prediction

Protein:	YJR141W
Organism:	Saccharomyces cerevisiae
Length:	347 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR141W.

Description	E-value	Query Range	Subject Range
YJR141W - Essential protein of unknown function gi\|207343750 - gi\|207343750\|gb\|EDZ71114.1\| YJR141Wp-like protein [Saccharomyces cerevisiae AWRI1631] YJ9I_YEAST - Uncharacterized protein YJR141W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR141W ...	0.0	[1..347]	[1..347]

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Predicted Domain #1

Region A:
Residues: [1-347]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQYVVEWLP RIQSISVVVE GWKQVEIKNL KDTLMSISGD EEQVEDILLP VEVEEKVDAS  60
   61 YKFKNRGKDL EWMTKLRSKS SKIYDSSIMS LPDGRWTKEE LRSDSDFSIE CLNCKQKIIS 120
  121 KDNCQVLNDM PSEFWFELMD YWHCHKPDVK EDKSSYTRFE TLKPSKNEIL IGSSYFQGTP 180
  181 ATFENVATTK ENDNVLCIKC SAVLGQVTAG SLYKLHKWKL QLIRSGNTYK FPPECDITIS 240
  241 LINVVKANSC RYVLVKCKTE SLLVWIFSVD IGVTLTGNKS FKRAMKLLYT NSVTTINRCL 300
  301 NRQVVEELDF QETSFNAFYS ALQHTNALLP SSMKKIGEWT ISYTSLI

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
binding	0.402276250313619	bayes_pls_golite062009
catalytic activity	0.223774911842048	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [278-347]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKSFKRAMKL LYTNSVTTIN RCLNRQVVEE LDFQETSFNA FYSALQHTNA LLPSSMKKIG  60
   61 EWTISYTSLI