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View Structure Prediction Details

Protein: YJR061W
Organism: Saccharomyces cerevisiae
Length: 935 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR061W.

Description E-value Query
Range
Subject
Range
MNN4_YEAST - Protein MNN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN4 PE=4 SV=2
MNN4 - Putative positive regulator of mannosylphosphate transferase (Mnn6p), involved in mannosylphosphoryl...
0.0 [6..909] [11..962]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [112..494] [1..396]
gi|19311002 - gi|19311002|gb|AAL86704.1|AF481861_1 Mnn4p [Candida albicans]
0.0 [270..607] [429..733]
gi|28925319, gi|... - gi|32413196|ref|XP_327078.1| hypothetical protein [Neurospora crassa], gi|28925319|gb|EAA34397.1| co...
gi|85110790 - gi|85110790|ref|XP_963633.1| hypothetical protein NCU06792 [Neurospora crassa OR74A]
2.0E-55 [407..570] [94..265]
gi|13182947 - gi|13182947|gb|AAK15000.1|AF233343_3 Mnm4-related protein [Candida glabrata]
2.0E-35 [16..153] [45..165]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLSLRRFSM YVLRSLRLHF KKIIITLLTI QLLFITIFVL GGRSSIIDGN WKSFMALFFK  60
   61 PLAYTNRNNN HASFDLRSKD NVAKLYEKMN FDTSGKWIDT YTLKNNLLTV KMGPEKGQVL 120
  121 DSVDELRYYD NDPRLVWSVL LDHLLESDSN EYAFSWY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DWANFDSTNK LIALRHTNIS CQFVCEGAFD KNVLEMVESE VQEPLFVTNR NKYDESLWYN  60
   61 RVRKVVDSNS VQQAIHDHCM NNDAYSNGTP FELPFIISEI SERLRPEVYD LQAKNHLLYS 120
  121 NFTPLSLTVL DSDKDAYRIN LKTTDSSKSN IVQTNLLQNY IKRHRNEMVN GDLIFNHTSM 180
  181 FEKFLHHGST KKRKLDVEAL DKTIYAGEYL ELSPSDFQFN AKERIIELET RLRSEGLPSH 240
  241 DTHYLRSLKT SVNTSPALQQ KYFAEASDIT DATADGHHRD RRFFSIG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [445-612]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HNLLNDPQEF EARLNSLIRN FQKFVKANGL ISWLSHGTLY GYLYDGLKFP WDVDHDLQMP  60
   61 IKHLHYLSQY FNQSLILEDP REGNGRFLLD VGSAITVGVH GNGENNIDAR FIDIDSGIYI 120
  121 DITGLSVSSD AAKQYMSKFV EEESSGESFS ALIEDYKFDE NDYFDEVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [613-935]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GREGLAKYTI HELMEWVNSH PDDFTDAEKN LVTKTYKKEL AISRSDYAEK DLSPKQRYLV  60
   61 NEKYNLYNCR NQHFSSLNII SPLRNTMFSG VSAFVPNRPI ATLNNEYKVP AKYGLLSFQG 120
  121 KVYLPEFRYW FSFADMKKFA NLQLKEPKIT RLESPLNDLK FSDISLLITN ILKCGFHSVF 180
  181 ASLFNSFDST VYRLKELEIQ YDPSLSEEEK SSLLKTLRRG MSKKIKSPEK DPIIYIYERK 240
  241 LWENVEKLLN ASNIYNIASQ VEKEKGKEFV ERSQQVYERN FDGFRLPDGG NSKTVNDLNS 300
  301 KGLNLFGDNK KTSNNIFGSD QKY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle