Protein: | RRD1 |
Organism: | Saccharomyces cerevisiae |
Length: | 393 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRD1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..393] | [1..393] |
|
0.0 | [9..320] | [17..323] |
|
0.0 | [9..320] | [17..322] |
|
0.0 | [9..320] | [17..323] |
|
0.0 | [9..308] | [92..385] |
|
0.0 | [17..367] | [13..340] |
Region A: Residues: [1-337] |
1 11 21 31 41 51 | | | | | | 1 MSLDRVDWPH ATFSTPVKRI FDTQTTLDFQ SSLAIHRIKY HLHKYTTLIS HCSDPDPHAT 60 61 ASSIAMVNGL MGVLDKLAHL IDETPPLPGP RRYGNLACRE WHHKLDERLP QWLQEMLPSE 120 121 YHEVVPELQY YLGNSFGSST RLDYGTGHEL SFMATVAALD MLGMFPHMRG ADVFLLFNKY 180 181 YTIMRRLILT YTLEPAGSHG VWGLDDHFHL VYILGSSQWQ LLDAQAPLQP REILDKSLVR 240 241 EYKDTNFYCQ GINFINEVKM GPFEEHSPIL YDIAVTVPRW SKVCKGLLKM YSVEVLKKFP 300 301 VVQHFWFGTG FFPWVNIQNG TDLPVFEEKE EESIEQA |
Detection Method: | |
Confidence: | 209.508638 |
Match: | PF03095 |
Description: | Phosphotyrosyl phosphate activator (PTPA) protein |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Term | Confidence | Notes |
binding | 1.8791829282582 | bayes_pls_golite062009 |
enzyme regulator activity | 1.7601888817048 | bayes_pls_golite062009 |
phosphatase regulator activity | 1.33200954243368 | bayes_pls_golite062009 |
protein phosphatase regulator activity | 1.2842291535489 | bayes_pls_golite062009 |
enzyme activator activity | 0.877491580866805 | bayes_pls_golite062009 |
phosphatase activator activity | 0.566631939970268 | bayes_pls_golite062009 |
protein binding | 0.492511638812294 | bayes_pls_golite062009 |
catalytic activity | 0.262417313750414 | bayes_pls_golite062009 |
protein phosphatase type 2A regulator activity | 0.132873007056084 | bayes_pls_golite062009 |
Region A: Residues: [338-393] |
1 11 21 31 41 51 | | | | | | 1 NAGSPGREQT STRFPTSTSM PPPGVPPSGN NINYLLSHQN QSHRNQTSFS RDRLRR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.455 | a.4.1 | Homeodomain-like |