| Protein: | TID3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 691 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TID3.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-95 | [1..690] | [1120..1843] |
|
|
4.0E-94 | [1..690] | [1123..1846] |
|
|
5.0E-94 | [1..690] | [137..860] |
|
|
7.0E-94 | [1..690] | [1121..1844] |
|
|
8.0E-94 | [1..690] | [1122..1845] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MQSSTSTDQH VLHHMDPHRF TSQIPTATSS QLRRRNSTNQ GLTDMINKSI ARNTISGTGI 60
61 PTGGINKNKR TRSTVAGGTN GTALALNDKS NSRNSVSRLS INQLGSLQQH LSNRDPRPLR 120
121 DKNFQSAIQE EIYDYLKKNK FDIETNHPIS IKFLKQPTQK GFIIIFKWLY LRLDPGYGFT 180
181 K
|
| Detection Method: |  |
| Confidence: | 46.431798 |
| Match: | PF03801 |
| Description: | HEC/Ndc80p family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [182-498] |
1 11 21 31 41 51
| | | | | |
1 SIENEIYQIL KNLRYPFLES INKSQISAVG GSNWHKFLGM LHWMVRTNIK LDMCLNKVDR 60
61 SLINQNTQEI TILSQPLKTL DEQDQRQERY ELMVEKLLID YFTESYKSFL KLEDNYEPSM 120
121 QELKLGFEKF VHIINTDIAN LQTQNDNLYE KYQEVMKISQ KIKTTREKWK ALKSDSNKYE 180
181 NYVNAMKQKS QEWPGKLEKM KSECELKEEE IKALQSNISE LHKILRKKGI STEQFELQNQ 240
241 EREKLTRELD KINIQSDKLT SSIKSRKLEA EGIFKSLLDT LRQYDSSIQN LTRSRSQLGH 300
301 NVNDSSLKIN ISENLLD
|
| Detection Method: | |
| Confidence: | 37.9794 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [499-585] |
1 11 21 31 41 51
| | | | | |
1 RDFHEGISYE QLFPKGSGIN ESIKKSILKL NDEIQERIKT IEKDNITLEK DIKNLKHDIN 60
61 EKTQINEKLE LELSEANSKF ELSKQEN
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [586-691] |
1 11 21 31 41 51
| | | | | |
1 ERLLVAQRIE IEKMEKKIND SNLLMKTKIS DAEELVTSTE LKLEELKVDL NRKRYKLHQQ 60
61 VIHVIDITSK FKINIQSSLE NSENELGNVI EELRNLEFET EHNVTN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.851 | 0.012 | microtubule nucleation | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [607-691] |
1 11 21 31 41 51
| | | | | |
1 NLLMKTKISD AEELVTSTEL KLEELKVDLN RKRYKLHQQV IHVIDITSKF KINIQSSLEN 60
61 SENELGNVIE ELRNLEFETE HNVTN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.851 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
